docs/Algorithms Reference/SystemML_Algorithms_Reference.tex

\begin{comment}

 Licensed to the Apache Software Foundation (ASF) under one
 or more contributor license agreements.  See the NOTICE file
 distributed with this work for additional information
 regarding copyright ownership.  The ASF licenses this file
 to you under the Apache License, Version 2.0 (the
 "License"); you may not use this file except in compliance
 with the License.  You may obtain a copy of the License at

   http://www.apache.org/licenses/LICENSE-2.0

 Unless required by applicable law or agreed to in writing,
 software distributed under the License is distributed on an
 "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
 KIND, either express or implied.  See the License for the
 specific language governing permissions and limitations
 under the License.

\end{comment}

\documentclass[letter]{article}
\usepackage{graphicx,amsmath,amssymb,amsthm,subfigure,color,url,multirow,rotating,comment}
\usepackage{tikz}
\usepackage[normalem]{ulem}
\usepackage[np,autolanguage]{numprint}
\usepackage{tabularx}

\usepackage[pdftex]{hyperref}
\hypersetup{
    unicode=false,          % non-Latin characters in Acrobat’s bookmarks
    pdftoolbar=true,        % show Acrobat’s toolbar?
    pdfmenubar=true,        % show Acrobat’s menu?
    pdffitwindow=true,      % window fit to page when opened
    pdfstartview={FitV},    % fits the width of the page to the window
    pdftitle={SystemML Algorithms Reference},    % title
    pdfauthor={SystemML Team}, % author
    pdfsubject={Documentation},   % subject of the document
    pdfkeywords={},         % list of keywords
    pdfnewwindow=true,      % links in new window
    bookmarksnumbered=true, % put section numbers in bookmarks
    bookmarksopen=true,     % open up bookmark tree
    bookmarksopenlevel=1,   % \maxdimen level to which bookmarks are open
    colorlinks=true,        % false: boxed links; true: colored links
    linkcolor=black,        % color of internal links  
    citecolor=blue,         % color of links to bibliography
    filecolor=black,        % color of file links
    urlcolor=black          % color of external links
}


\newtheorem{definition}{Definition}
\newtheorem{example}{Example}

\newcommand{\Paragraph}[1]{\vspace*{1ex} \noindent {\bf #1} \hspace*{1ex}}
\newenvironment{Itemize}{\vspace{-0.5ex}\begin{itemize}\setlength{\itemsep}{-0.2ex}
}{\end{itemize}\vspace{-0.5ex}}
\newenvironment{Enumerate}{\vspace{-0.5ex}\begin{enumerate}\setlength{\itemsep}{-0.2ex}
}{\end{enumerate}\vspace{-0.5ex}}
\newenvironment{Description}{\vspace{-0.5ex}\begin{description}\setlength{\itemsep}{-0.2ex}
}{\end{description}\vspace{-0.5ex}}


\newcommand{\SystemML}{\texttt{SystemML} }
\newcommand{\hml}{\texttt{hadoop jar SystemML.jar} }
\newcommand{\pxp}{\mathbin{\texttt{\%\textasteriskcentered\%}}}
\newcommand{\todo}[1]{{{\color{red}TODO: #1}}}
\newcommand{\Normal}{\ensuremath{\mathop{\mathrm{Normal}}\nolimits}}
\newcommand{\Prob}{\ensuremath{\mathop{\mathrm{Prob}\hspace{0.5pt}}\nolimits}}
\newcommand{\E}{\ensuremath{\mathop{\mathrm{E}}\nolimits}}
\newcommand{\mean}{\ensuremath{\mathop{\mathrm{mean}}\nolimits}}
\newcommand{\Var}{\ensuremath{\mathop{\mathrm{Var}}\nolimits}}
\newcommand{\Cov}{\ensuremath{\mathop{\mathrm{Cov}}\nolimits}}
\newcommand{\stdev}{\ensuremath{\mathop{\mathrm{st.dev}}\nolimits}}
\newcommand{\atan}{\ensuremath{\mathop{\mathrm{arctan}}\nolimits}}
\newcommand{\diag}{\ensuremath{\mathop{\mathrm{diag}}\nolimits}}
\newcommand{\const}{\ensuremath{\mathop{\mathrm{const}}\nolimits}}
\newcommand{\eps}{\varepsilon}

\sloppy

%%%%%%%%%%%%%%%%%%%%% 
% header
%%%%%%%%%%%%%%%%%%%%%

\title{\LARGE{{\SystemML Algorithms Reference}}} 
\date{\today}

%%%%%%%%%%%%%%%%%%%%%
% document start
%%%%%%%%%%%%%%%%%%%%%
\begin{document}	

%\pagenumbering{roman}
\maketitle

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Descriptive Statistics}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\input{DescriptiveStats}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Classification}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\input{LogReg}

\subsection{Support Vector Machines}

\input{BinarySVM}

\input{MultiSVM}

\input{NaiveBayes}

\input{DecisionTrees}

\input{RandomForest}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Clustering}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\input{Kmeans}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Regression}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\input{LinReg}

\input{StepLinRegDS}

\input{GLM}

\input{StepGLM}

\input{GLMpredict.tex}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Matrix Factorization}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\input{pca}

\input{ALS.tex}

%%{\color{red}\subsection{GNMF}}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%{\color{red}\section{Sequence Mining}}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%



%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\section{Survival Analysis}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\input{KaplanMeier}

\input{Cox}

\bibliographystyle{abbrv}

\bibliography{SystemML_ALgorithms_Reference}

	
%%%%%%%%%%%%%%%%%%%%%
% document end
%%%%%%%%%%%%%%%%%%%%%
\end{document}