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| <div class="subTitle">org.apache.sysds.runtime.io</div> |
| <h2 title="Class ReaderTextCellParallel" class="title">Class ReaderTextCellParallel</h2> |
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| <ul class="inheritance"> |
| <li><a href="../../../../../org/apache/sysds/runtime/io/MatrixReader.html" title="class in org.apache.sysds.runtime.io">org.apache.sysds.runtime.io.MatrixReader</a></li> |
| <li> |
| <ul class="inheritance"> |
| <li><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html" title="class in org.apache.sysds.runtime.io">org.apache.sysds.runtime.io.ReaderTextCell</a></li> |
| <li> |
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| <li>org.apache.sysds.runtime.io.ReaderTextCellParallel</li> |
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| <pre>public class <span class="typeNameLabel">ReaderTextCellParallel</span> |
| extends <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html" title="class in org.apache.sysds.runtime.io">ReaderTextCell</a></pre> |
| <div class="block">Parallel version of ReaderTextCell.java. To summarize, we create read tasks per split |
| and use a fixed-size thread pool, to executed these tasks. If the target matrix is dense, |
| the inserts are done lock-free. If the matrix is sparse, we use a buffer to collect |
| unordered input cells, lock the the target sparse matrix once, and append all buffered values. |
| |
| Note MatrixMarket: |
| 1) For matrix market files each read task probes for comments until it finds data because |
| for very small tasks or large comments, any split might encounter % or %%. Hence, |
| the parallel reader does not do the validity check for. |
| 2) In extreme scenarios, the last comment might be in one split, and the following meta data |
| in the subsequent split. This would create incorrect results or errors. However, this |
| scenario is extremely unlikely (num threads > num lines if 1 comment line) and hence ignored |
| similar to our parallel MR setting (but there we have a 128MB guarantee). |
| 3) However, we use MIN_FILESIZE_MM (8KB) to give guarantees for the common case of small headers |
| in order the issue described in (2).</div> |
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| <td class="colFirst"><code>static class </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCellParallel.CellBuffer.html" title="class in org.apache.sysds.runtime.io">ReaderTextCellParallel.CellBuffer</a></span></code> |
| <div class="block">Useful class for buffering unordered cells before locking target onces and |
| appending all buffered cells.</div> |
| </td> |
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| <td class="colFirst"><code>static class </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCellParallel.CountNnzTask.html" title="class in org.apache.sysds.runtime.io">ReaderTextCellParallel.CountNnzTask</a></span></code> </td> |
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| <td class="colFirst"><code>static class </code></td> |
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| <code><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#Z:Z_allowRawRead">_allowRawRead</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#Z:Z_isMMFile">_isMMFile</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#Z:Z_mmProps">_mmProps</a></code></li> |
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| <td class="colFirst"><code>protected void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCellParallel.html#readTextCellMatrixFromHDFS-org.apache.hadoop.fs.Path-org.apache.hadoop.mapred.JobConf-org.apache.sysds.runtime.matrix.data.MatrixBlock-long-long-int-">readTextCellMatrixFromHDFS</a></span>(org.apache.hadoop.fs.Path path, |
| org.apache.hadoop.mapred.JobConf job, |
| <a href="../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> dest, |
| long rlen, |
| long clen, |
| int blen)</code> </td> |
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| <code><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#appendCell-org.apache.sysds.runtime.matrix.data.IJV-org.apache.sysds.runtime.data.DenseBlock-org.apache.sysds.runtime.io.FileFormatPropertiesMM-">appendCell</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#appendCell-org.apache.sysds.runtime.matrix.data.IJV-org.apache.sysds.runtime.matrix.data.MatrixBlock-org.apache.sysds.runtime.io.FileFormatPropertiesMM-">appendCell</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#parseCell-java.lang.String-org.apache.sysds.runtime.util.FastStringTokenizer-org.apache.sysds.runtime.matrix.data.IJV-org.apache.sysds.runtime.io.FileFormatPropertiesMM-">parseCell</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#readMatrixFromHDFS-java.lang.String-long-long-int-long-">readMatrixFromHDFS</a>, <a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#readMatrixFromInputStream-java.io.InputStream-long-long-int-long-">readMatrixFromInputStream</a></code></li> |
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| <h4>ReaderTextCellParallel</h4> |
| <pre>public ReaderTextCellParallel(<a href="../../../../../org/apache/sysds/common/Types.FileFormat.html" title="enum in org.apache.sysds.common">Types.FileFormat</a> fmt)</pre> |
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| <pre>protected void readTextCellMatrixFromHDFS(org.apache.hadoop.fs.Path path, |
| org.apache.hadoop.mapred.JobConf job, |
| <a href="../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> dest, |
| long rlen, |
| long clen, |
| int blen) |
| throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></pre> |
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| <dd><code><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html#readTextCellMatrixFromHDFS-org.apache.hadoop.fs.Path-org.apache.hadoop.mapred.JobConf-org.apache.sysds.runtime.matrix.data.MatrixBlock-long-long-int-">readTextCellMatrixFromHDFS</a></code> in class <code><a href="../../../../../org/apache/sysds/runtime/io/ReaderTextCell.html" title="class in org.apache.sysds.runtime.io">ReaderTextCell</a></code></dd> |
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