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| <div class="subTitle">org.apache.sysds.runtime.compress.colgroup</div> |
| <h2 title="Class ColGroup" class="title">Class ColGroup</h2> |
| </div> |
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| <ul class="inheritance"> |
| <li><a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">java.lang.Object</a></li> |
| <li> |
| <ul class="inheritance"> |
| <li>org.apache.sysds.runtime.compress.colgroup.ColGroup</li> |
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| </dl> |
| <dl> |
| <dt>Direct Known Subclasses:</dt> |
| <dd><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroupUncompressed.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroupUncompressed</a>, <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroupValue.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroupValue</a></dd> |
| </dl> |
| <hr> |
| <br> |
| <pre>public abstract class <span class="typeNameLabel">ColGroup</span> |
| extends <a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</a> |
| implements <a href="https://docs.oracle.com/javase/8/docs/api/java/io/Serializable.html?is-external=true" title="class or interface in java.io">Serializable</a></pre> |
| <div class="block">Class that stores information about a column group within a compressed matrix block. There are subclasses specific to |
| each compression type.</div> |
| <dl> |
| <dt><span class="seeLabel">See Also:</span></dt> |
| <dd><a href="../../../../../../serialized-form.html#org.apache.sysds.runtime.compress.colgroup.ColGroup">Serialized Form</a></dd> |
| </dl> |
| </li> |
| </ul> |
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| <tr> |
| <th class="colFirst" scope="col">Modifier and Type</th> |
| <th class="colLast" scope="col">Class and Description</th> |
| </tr> |
| <tr class="altColor"> |
| <td class="colFirst"><code>protected class </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupRowIterator.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupRowIterator</a></span></code> |
| <div class="block">Base class for column group row iterators.</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colFirst"><code>protected static class </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupType</a></span></code> |
| <div class="block">Concrete ColGroupType |
| |
| Protected such that outside the ColGroup package it should be unknown which specific subtype is used.</div> |
| </td> |
| </tr> |
| <tr class="altColor"> |
| <td class="colFirst"><code>static class </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.CompressionType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.CompressionType</a></span></code> |
| <div class="block">Public Group types supported |
| |
| Note For instance DDC is called DDC not DDC1, or DDC2 which is a specific subtype of the DDC.</div> |
| </td> |
| </tr> |
| </table> |
| </li> |
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| <caption><span>Fields</span><span class="tabEnd"> </span></caption> |
| <tr> |
| <th class="colFirst" scope="col">Modifier and Type</th> |
| <th class="colLast" scope="col">Field and Description</th> |
| </tr> |
| <tr class="altColor"> |
| <td class="colFirst"><code>protected int[]</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#Z:Z_colIndexes">_colIndexes</a></span></code> |
| <div class="block">The ColGroup Indexes 0 offset, contained in the ColGroup</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colFirst"><code>protected int</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#Z:Z_numRows">_numRows</a></span></code> |
| <div class="block">Number of rows in the matrix, for use by child classes.</div> |
| </td> |
| </tr> |
| <tr class="altColor"> |
| <td class="colFirst"><code>protected boolean</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#Z:Z_zeros">_zeros</a></span></code> |
| <div class="block">ColGroup Implementation Contains zero values</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colFirst"><code>protected static org.apache.commons.logging.Log</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#LOG">LOG</a></span></code> </td> |
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| <tr> |
| <th class="colFirst" scope="col">Modifier</th> |
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| <td class="colFirst"><code>protected </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#ColGroup--">ColGroup</a></span>()</code> |
| <div class="block">Empty constructor, used for serializing into an empty new object of ColGroup.</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colFirst"><code>protected </code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#ColGroup-int:A-int-">ColGroup</a></span>(int[] colIndices, |
| int numRows)</code> |
| <div class="block">Main constructor.</div> |
| </td> |
| </tr> |
| </table> |
| </li> |
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| <caption><span id="t0" class="activeTableTab"><span>All Methods</span><span class="tabEnd"> </span></span><span id="t2" class="tableTab"><span><a href="javascript:show(2);">Instance Methods</a></span><span class="tabEnd"> </span></span><span id="t3" class="tableTab"><span><a href="javascript:show(4);">Abstract Methods</a></span><span class="tabEnd"> </span></span><span id="t4" class="tableTab"><span><a href="javascript:show(8);">Concrete Methods</a></span><span class="tabEnd"> </span></span></caption> |
| <tr> |
| <th class="colFirst" scope="col">Modifier and Type</th> |
| <th class="colLast" scope="col">Method and Description</th> |
| </tr> |
| <tr id="i0" class="altColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#countNonZerosPerRow-int:A-int-int-">countNonZerosPerRow</a></span>(int[] rnnz, |
| int rl, |
| int ru)</code> |
| <div class="block">Count the number of non-zeros per row</div> |
| </td> |
| </tr> |
| <tr id="i1" class="rowColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-">decompressToBlock</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int colpos)</code> |
| <div class="block">Decompress to block.</div> |
| </td> |
| </tr> |
| <tr id="i2" class="altColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int:A-">decompressToBlock</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int[] colIndexTargets)</code> |
| <div class="block">Decompress the contents of this column group into uncompressed packed columns</div> |
| </td> |
| </tr> |
| <tr id="i3" class="rowColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-int-">decompressToBlock</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int rl, |
| int ru)</code> |
| <div class="block">Decompress the contents of this column group into the specified full matrix block.</div> |
| </td> |
| </tr> |
| <tr id="i4" class="altColor"> |
| <td class="colFirst"><code>long</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#estimateInMemorySize--">estimateInMemorySize</a></span>()</code> |
| <div class="block">Note: Must be overridden by child classes to account for additional data and metadata</div> |
| </td> |
| </tr> |
| <tr id="i5" class="rowColor"> |
| <td class="colFirst"><code>abstract double</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#get-int-int-">get</a></span>(int r, |
| int c)</code> |
| <div class="block">Get the value at a global row/column position.</div> |
| </td> |
| </tr> |
| <tr id="i6" class="altColor"> |
| <td class="colFirst"><code>protected abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupType</a></code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getColGroupType--">getColGroupType</a></span>()</code> |
| <div class="block">Internally get the specific type of ColGroup, this could be extracted from the object but that does not allow for |
| nice switches in the code.</div> |
| </td> |
| </tr> |
| <tr id="i7" class="rowColor"> |
| <td class="colFirst"><code>int</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getColIndex-int-">getColIndex</a></span>(int colNum)</code> |
| <div class="block">Obtain a column index value.</div> |
| </td> |
| </tr> |
| <tr id="i8" class="altColor"> |
| <td class="colFirst"><code>int[]</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getColIndices--">getColIndices</a></span>()</code> |
| <div class="block">Obtain the offsets of the columns in the matrix block that make up the group</div> |
| </td> |
| </tr> |
| <tr id="i9" class="rowColor"> |
| <td class="colFirst"><code>abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.CompressionType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.CompressionType</a></code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getCompType--">getCompType</a></span>()</code> |
| <div class="block">Obtain the compression type.</div> |
| </td> |
| </tr> |
| <tr id="i10" class="altColor"> |
| <td class="colFirst"><code>abstract long</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getExactSizeOnDisk--">getExactSizeOnDisk</a></span>()</code> |
| <div class="block">Returns the exact serialized size of column group.</div> |
| </td> |
| </tr> |
| <tr id="i11" class="rowColor"> |
| <td class="colFirst"><code>abstract <a href="https://docs.oracle.com/javase/8/docs/api/java/util/Iterator.html?is-external=true" title="class or interface in java.util">Iterator</a><<a href="../../../../../../org/apache/sysds/runtime/matrix/data/IJV.html" title="class in org.apache.sysds.runtime.matrix.data">IJV</a>></code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getIterator-int-int-boolean-boolean-">getIterator</a></span>(int rl, |
| int ru, |
| boolean inclZeros, |
| boolean rowMajor)</code> |
| <div class="block">Create a column group iterator for a row index range.</div> |
| </td> |
| </tr> |
| <tr id="i12" class="altColor"> |
| <td class="colFirst"><code>int</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getNumCols--">getNumCols</a></span>()</code> |
| <div class="block">Obtain the number of columns in this column group.</div> |
| </td> |
| </tr> |
| <tr id="i13" class="rowColor"> |
| <td class="colFirst"><code>int</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getNumRows--">getNumRows</a></span>()</code> |
| <div class="block">Get number of rows contained in the ColGroup.</div> |
| </td> |
| </tr> |
| <tr id="i14" class="altColor"> |
| <td class="colFirst"><code>abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupRowIterator.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupRowIterator</a></code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#getRowIterator-int-int-">getRowIterator</a></span>(int rl, |
| int ru)</code> |
| <div class="block">Create a dense row iterator for a row index range.</div> |
| </td> |
| </tr> |
| <tr id="i15" class="rowColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#leftMultByRowVector-org.apache.sysds.runtime.matrix.data.MatrixBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-">leftMultByRowVector</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> vector, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result)</code> |
| <div class="block">Multiply the slice of the matrix that this column group represents by a row vector on the left (the original |
| column vector is assumed to be transposed already i.e.</div> |
| </td> |
| </tr> |
| <tr id="i16" class="altColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#readFields-java.io.DataInput-">readFields</a></span>(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataInput.html?is-external=true" title="class or interface in java.io">DataInput</a> in)</code> |
| <div class="block">Deserializes column group from data input.</div> |
| </td> |
| </tr> |
| <tr id="i17" class="rowColor"> |
| <td class="colFirst"><code>void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#readFields-java.io.DataInput-boolean-">readFields</a></span>(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataInput.html?is-external=true" title="class or interface in java.io">DataInput</a> in, |
| boolean skipDict)</code> |
| <div class="block">Deserializes column group from data input.</div> |
| </td> |
| </tr> |
| <tr id="i18" class="altColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#rightMultByVector-org.apache.sysds.runtime.matrix.data.MatrixBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-int-">rightMultByVector</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> vector, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result, |
| int rl, |
| int ru)</code> |
| <div class="block">Multiply the slice of the matrix that this column group represents by a vector on the right.</div> |
| </td> |
| </tr> |
| <tr id="i19" class="rowColor"> |
| <td class="colFirst"><code>abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroup</a></code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#scalarOperation-org.apache.sysds.runtime.matrix.operators.ScalarOperator-">scalarOperation</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/operators/ScalarOperator.html" title="class in org.apache.sysds.runtime.matrix.operators">ScalarOperator</a> op)</code> |
| <div class="block">Perform the specified scalar operation directly on the compressed column group, without decompressing individual |
| cells if possible.</div> |
| </td> |
| </tr> |
| <tr id="i20" class="altColor"> |
| <td class="colFirst"><code>void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#shiftColIndices-int-">shiftColIndices</a></span>(int offset)</code> </td> |
| </tr> |
| <tr id="i21" class="rowColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#unaryAggregateOperations-org.apache.sysds.runtime.matrix.operators.AggregateUnaryOperator-org.apache.sysds.runtime.matrix.data.MatrixBlock-">unaryAggregateOperations</a></span>(<a href="../../../../../../org/apache/sysds/runtime/matrix/operators/AggregateUnaryOperator.html" title="class in org.apache.sysds.runtime.matrix.operators">AggregateUnaryOperator</a> op, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result)</code> |
| <div class="block">Unary Aggregate operator, since aggregate operators require new object output, the output becomes an uncompressed |
| matrix.</div> |
| </td> |
| </tr> |
| <tr id="i22" class="altColor"> |
| <td class="colFirst"><code>abstract void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#write-java.io.DataOutput-">write</a></span>(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataOutput.html?is-external=true" title="class or interface in java.io">DataOutput</a> out)</code> |
| <div class="block">Serializes column group to data output.</div> |
| </td> |
| </tr> |
| <tr id="i23" class="rowColor"> |
| <td class="colFirst"><code>void</code></td> |
| <td class="colLast"><code><span class="memberNameLink"><a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html#write-java.io.DataOutput-boolean-">write</a></span>(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataOutput.html?is-external=true" title="class or interface in java.io">DataOutput</a> out, |
| boolean skipDict)</code> |
| <div class="block">Serializes column group to data output.</div> |
| </td> |
| </tr> |
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| <h3>Methods inherited from class java.lang.<a href="https://docs.oracle.com/javase/8/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</a></h3> |
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| </ul> |
| </li> |
| </ul> |
| </li> |
| </ul> |
| </div> |
| <div class="details"> |
| <ul class="blockList"> |
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| </a> |
| <h3>Field Detail</h3> |
| <a name="LOG"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>LOG</h4> |
| <pre>protected static final org.apache.commons.logging.Log LOG</pre> |
| </li> |
| </ul> |
| <a name="Z:Z_colIndexes"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>_colIndexes</h4> |
| <pre>protected int[] _colIndexes</pre> |
| <div class="block">The ColGroup Indexes 0 offset, contained in the ColGroup</div> |
| </li> |
| </ul> |
| <a name="Z:Z_zeros"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>_zeros</h4> |
| <pre>protected boolean _zeros</pre> |
| <div class="block">ColGroup Implementation Contains zero values</div> |
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| </ul> |
| <a name="Z:Z_numRows"> |
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| </a> |
| <ul class="blockListLast"> |
| <li class="blockList"> |
| <h4>_numRows</h4> |
| <pre>protected int _numRows</pre> |
| <div class="block">Number of rows in the matrix, for use by child classes.</div> |
| </li> |
| </ul> |
| </li> |
| </ul> |
| <!-- ========= CONSTRUCTOR DETAIL ======== --> |
| <ul class="blockList"> |
| <li class="blockList"><a name="constructor.detail"> |
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| </a> |
| <h3>Constructor Detail</h3> |
| <a name="ColGroup--"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>ColGroup</h4> |
| <pre>protected ColGroup()</pre> |
| <div class="block">Empty constructor, used for serializing into an empty new object of ColGroup.</div> |
| </li> |
| </ul> |
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| <li class="blockList"> |
| <h4>ColGroup</h4> |
| <pre>protected ColGroup(int[] colIndices, |
| int numRows)</pre> |
| <div class="block">Main constructor.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>colIndices</code> - offsets of the columns in the matrix block that make up the group</dd> |
| <dd><code>numRows</code> - total number of rows in the block</dd> |
| </dl> |
| </li> |
| </ul> |
| </li> |
| </ul> |
| <!-- ============ METHOD DETAIL ========== --> |
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| </a> |
| <h3>Method Detail</h3> |
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| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getColIndices</h4> |
| <pre>public int[] getColIndices()</pre> |
| <div class="block">Obtain the offsets of the columns in the matrix block that make up the group</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>offsets of the columns in the matrix block that make up the group</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="getColIndex-int-"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getColIndex</h4> |
| <pre>public int getColIndex(int colNum)</pre> |
| <div class="block">Obtain a column index value.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>colNum</code> - column number</dd> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>column index value</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="getNumRows--"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getNumRows</h4> |
| <pre>public int getNumRows()</pre> |
| <div class="block">Get number of rows contained in the ColGroup.</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>An integer that is the number of rows.</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="getNumCols--"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getNumCols</h4> |
| <pre>public int getNumCols()</pre> |
| <div class="block">Obtain the number of columns in this column group.</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>number of columns in this column group</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="getCompType--"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getCompType</h4> |
| <pre>public abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.CompressionType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.CompressionType</a> getCompType()</pre> |
| <div class="block">Obtain the compression type.</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>How the elements of the column group are compressed.</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="getColGroupType--"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>getColGroupType</h4> |
| <pre>protected abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupType.html" title="enum in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupType</a> getColGroupType()</pre> |
| <div class="block">Internally get the specific type of ColGroup, this could be extracted from the object but that does not allow for |
| nice switches in the code.</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>ColGroupType of the object.</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="shiftColIndices-int-"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>shiftColIndices</h4> |
| <pre>public void shiftColIndices(int offset)</pre> |
| </li> |
| </ul> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>estimateInMemorySize</h4> |
| <pre>public long estimateInMemorySize()</pre> |
| <div class="block">Note: Must be overridden by child classes to account for additional data and metadata</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>an upper bound on the number of bytes used to store this ColGroup in memory.</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-int-"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>decompressToBlock</h4> |
| <pre>public abstract void decompressToBlock(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int rl, |
| int ru)</pre> |
| <div class="block">Decompress the contents of this column group into the specified full matrix block.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>target</code> - a matrix block where the columns covered by this column group have not yet been filled in.</dd> |
| <dd><code>rl</code> - row lower</dd> |
| <dd><code>ru</code> - row upper</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int:A-"> |
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| </a> |
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| <h4>decompressToBlock</h4> |
| <pre>public abstract void decompressToBlock(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int[] colIndexTargets)</pre> |
| <div class="block">Decompress the contents of this column group into uncompressed packed columns</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>target</code> - a dense matrix block. The block must have enough space to hold the contents of this column |
| group.</dd> |
| <dd><code>colIndexTargets</code> - array that maps column indices in the original matrix block to columns of target.</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="decompressToBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-"> |
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| </a> |
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| <h4>decompressToBlock</h4> |
| <pre>public abstract void decompressToBlock(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> target, |
| int colpos)</pre> |
| <div class="block">Decompress to block.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>target</code> - dense output vector</dd> |
| <dd><code>colpos</code> - column to decompress, error if larger or equal numCols</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="write-java.io.DataOutput-"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>write</h4> |
| <pre>public abstract void write(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataOutput.html?is-external=true" title="class or interface in java.io">DataOutput</a> out) |
| throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></pre> |
| <div class="block">Serializes column group to data output.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>out</code> - data output</dd> |
| <dt><span class="throwsLabel">Throws:</span></dt> |
| <dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></code> - if IOException occurs</dd> |
| </dl> |
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| <h4>write</h4> |
| <pre>public void write(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataOutput.html?is-external=true" title="class or interface in java.io">DataOutput</a> out, |
| boolean skipDict) |
| throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></pre> |
| <div class="block">Serializes column group to data output.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>out</code> - data output</dd> |
| <dd><code>skipDict</code> - skip shared dictionary</dd> |
| <dt><span class="throwsLabel">Throws:</span></dt> |
| <dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></code> - if IOException occurs</dd> |
| </dl> |
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| </ul> |
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| </a> |
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| <h4>readFields</h4> |
| <pre>public abstract void readFields(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataInput.html?is-external=true" title="class or interface in java.io">DataInput</a> in) |
| throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></pre> |
| <div class="block">Deserializes column group from data input.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>in</code> - data input</dd> |
| <dt><span class="throwsLabel">Throws:</span></dt> |
| <dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></code> - if IOException occurs</dd> |
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| <h4>readFields</h4> |
| <pre>public void readFields(<a href="https://docs.oracle.com/javase/8/docs/api/java/io/DataInput.html?is-external=true" title="class or interface in java.io">DataInput</a> in, |
| boolean skipDict) |
| throws <a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></pre> |
| <div class="block">Deserializes column group from data input.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>in</code> - data input</dd> |
| <dd><code>skipDict</code> - skip shared dictionary</dd> |
| <dt><span class="throwsLabel">Throws:</span></dt> |
| <dd><code><a href="https://docs.oracle.com/javase/8/docs/api/java/io/IOException.html?is-external=true" title="class or interface in java.io">IOException</a></code> - if IOException occurs</dd> |
| </dl> |
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| </ul> |
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| </a> |
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| <li class="blockList"> |
| <h4>getExactSizeOnDisk</h4> |
| <pre>public abstract long getExactSizeOnDisk()</pre> |
| <div class="block">Returns the exact serialized size of column group. This can be used for example for buffer preallocation.</div> |
| <dl> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>exact serialized size for column group</dd> |
| </dl> |
| </li> |
| </ul> |
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| </a> |
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| <h4>get</h4> |
| <pre>public abstract double get(int r, |
| int c)</pre> |
| <div class="block">Get the value at a global row/column position.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>r</code> - row</dd> |
| <dd><code>c</code> - column</dd> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>value at the row/column position</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="rightMultByVector-org.apache.sysds.runtime.matrix.data.MatrixBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-int-int-"> |
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| </a> |
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| <h4>rightMultByVector</h4> |
| <pre>public abstract void rightMultByVector(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> vector, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result, |
| int rl, |
| int ru)</pre> |
| <div class="block">Multiply the slice of the matrix that this column group represents by a vector on the right.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>vector</code> - vector to multiply by (tall vector)</dd> |
| <dd><code>result</code> - accumulator for holding the result</dd> |
| <dd><code>rl</code> - row lower</dd> |
| <dd><code>ru</code> - row upper if the internal SystemML code that performs the multiplication experiences an error</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="leftMultByRowVector-org.apache.sysds.runtime.matrix.data.MatrixBlock-org.apache.sysds.runtime.matrix.data.MatrixBlock-"> |
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| <h4>leftMultByRowVector</h4> |
| <pre>public abstract void leftMultByRowVector(<a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> vector, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result)</pre> |
| <div class="block">Multiply the slice of the matrix that this column group represents by a row vector on the left (the original |
| column vector is assumed to be transposed already i.e. its size now is 1xn).</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>vector</code> - row vector</dd> |
| <dd><code>result</code> - matrix block result</dd> |
| </dl> |
| </li> |
| </ul> |
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| <h4>scalarOperation</h4> |
| <pre>public abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroup</a> scalarOperation(<a href="../../../../../../org/apache/sysds/runtime/matrix/operators/ScalarOperator.html" title="class in org.apache.sysds.runtime.matrix.operators">ScalarOperator</a> op)</pre> |
| <div class="block">Perform the specified scalar operation directly on the compressed column group, without decompressing individual |
| cells if possible.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>op</code> - operation to perform</dd> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>version of this column group with the operation applied</dd> |
| </dl> |
| </li> |
| </ul> |
| <a name="unaryAggregateOperations-org.apache.sysds.runtime.matrix.operators.AggregateUnaryOperator-org.apache.sysds.runtime.matrix.data.MatrixBlock-"> |
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| <h4>unaryAggregateOperations</h4> |
| <pre>public abstract void unaryAggregateOperations(<a href="../../../../../../org/apache/sysds/runtime/matrix/operators/AggregateUnaryOperator.html" title="class in org.apache.sysds.runtime.matrix.operators">AggregateUnaryOperator</a> op, |
| <a href="../../../../../../org/apache/sysds/runtime/matrix/data/MatrixBlock.html" title="class in org.apache.sysds.runtime.matrix.data">MatrixBlock</a> result)</pre> |
| <div class="block">Unary Aggregate operator, since aggregate operators require new object output, the output becomes an uncompressed |
| matrix.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>op</code> - The operator used</dd> |
| <dd><code>result</code> - the output matrix block.</dd> |
| </dl> |
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| <h4>getIterator</h4> |
| <pre>public abstract <a href="https://docs.oracle.com/javase/8/docs/api/java/util/Iterator.html?is-external=true" title="class or interface in java.util">Iterator</a><<a href="../../../../../../org/apache/sysds/runtime/matrix/data/IJV.html" title="class in org.apache.sysds.runtime.matrix.data">IJV</a>> getIterator(int rl, |
| int ru, |
| boolean inclZeros, |
| boolean rowMajor)</pre> |
| <div class="block">Create a column group iterator for a row index range.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>rl</code> - row lower index, inclusive</dd> |
| <dd><code>ru</code> - row upper index, exclusive</dd> |
| <dd><code>inclZeros</code> - include zero values into scope of iterator</dd> |
| <dd><code>rowMajor</code> - use a row major iteration order</dd> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>an iterator instance</dd> |
| </dl> |
| </li> |
| </ul> |
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| <h4>getRowIterator</h4> |
| <pre>public abstract <a href="../../../../../../org/apache/sysds/runtime/compress/colgroup/ColGroup.ColGroupRowIterator.html" title="class in org.apache.sysds.runtime.compress.colgroup">ColGroup.ColGroupRowIterator</a> getRowIterator(int rl, |
| int ru)</pre> |
| <div class="block">Create a dense row iterator for a row index range. This iterator implies the inclusion of zeros and row-major |
| iteration order.</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>rl</code> - row lower index, inclusive</dd> |
| <dd><code>ru</code> - row upper index, exclusive</dd> |
| <dt><span class="returnLabel">Returns:</span></dt> |
| <dd>an iterator instance</dd> |
| </dl> |
| </li> |
| </ul> |
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| <h4>countNonZerosPerRow</h4> |
| <pre>public abstract void countNonZerosPerRow(int[] rnnz, |
| int rl, |
| int ru)</pre> |
| <div class="block">Count the number of non-zeros per row</div> |
| <dl> |
| <dt><span class="paramLabel">Parameters:</span></dt> |
| <dd><code>rnnz</code> - non-zeros per row</dd> |
| <dd><code>rl</code> - row lower bound, inclusive</dd> |
| <dd><code>ru</code> - row upper bound, exclusive</dd> |
| </dl> |
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