src/test/java/org/apache/sysds/test/functions/quaternary/WeightedSigmoidTest.java - systemds - Git at Google

 /*
  * Licensed to the Apache Software Foundation (ASF) under one
  * or more contributor license agreements.  See the NOTICE file
  * distributed with this work for additional information
  * regarding copyright ownership.  The ASF licenses this file
  * to you under the Apache License, Version 2.0 (the
  * "License"); you may not use this file except in compliance
  * with the License.  You may obtain a copy of the License at
  *
  *   http://www.apache.org/licenses/LICENSE-2.0
  *
  * Unless required by applicable law or agreed to in writing,
  * software distributed under the License is distributed on an
  * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
  * KIND, either express or implied.  See the License for the
  * specific language governing permissions and limitations
  * under the License.
  */

 package org.apache.sysds.test.functions.quaternary;

 import java.util.HashMap;

 import org.junit.AfterClass;
 import org.junit.Assert;
 import org.junit.BeforeClass;
 import org.junit.Test;
 import org.apache.sysds.api.DMLScript;
 import org.apache.sysds.common.Types.ExecMode;
 import org.apache.sysds.hops.OptimizerUtils;
 import org.apache.sysds.hops.QuaternaryOp;
 import org.apache.sysds.lops.WeightedSigmoid;
 import org.apache.sysds.lops.LopProperties.ExecType;
 import org.apache.sysds.runtime.matrix.data.MatrixValue.CellIndex;
 import org.apache.sysds.runtime.meta.MatrixCharacteristics;
 import org.apache.sysds.test.AutomatedTestBase;
 import org.apache.sysds.test.TestConfiguration;
 import org.apache.sysds.test.TestUtils;
 import org.apache.sysds.utils.Statistics;

 /**
  *
  *
  */
 public class WeightedSigmoidTest extends AutomatedTestBase
 {

 	private final static String TEST_NAME1 = "WeightedSigmoidP1";
 	private final static String TEST_NAME2 = "WeightedSigmoidP2";
 	private final static String TEST_NAME3 = "WeightedSigmoidP3";
 	private final static String TEST_NAME4 = "WeightedSigmoidP4";

 	private final static String TEST_DIR = "functions/quaternary/";
 	private final static String TEST_CLASS_DIR = TEST_DIR + WeightedSigmoidTest.class.getSimpleName() + "/";

 	private final static double eps = 1e-10;

 	private final static int rows = 1201;
 	private final static int cols = 1103;
 	private final static int rank = 10;
 	private final static double spSparse = 0.001;
 	private final static double spDense = 0.6;

 	@Override
 	public void setUp()
 	{
 		TestUtils.clearAssertionInformation();
 		addTestConfiguration(TEST_NAME1,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME1,new String[]{"R"}));
 		addTestConfiguration(TEST_NAME2,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME2,new String[]{"R"}));
 		addTestConfiguration(TEST_NAME3,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME3,new String[]{"R"}));
 		addTestConfiguration(TEST_NAME4,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME4,new String[]{"R"}));

 		if (TEST_CACHE_ENABLED) {
 			setOutAndExpectedDeletionDisabled(true);
 		}
 	}

 	@BeforeClass
 	public static void init()
 	{
 		TestUtils.clearDirectory(TEST_DATA_DIR + TEST_CLASS_DIR);
 	}

 	@AfterClass
 	public static void cleanUp()
 	{
 		if (TEST_CACHE_ENABLED) {
 			TestUtils.clearDirectory(TEST_DATA_DIR + TEST_CLASS_DIR);
 		}
 	}

 	@Test
 	public void testSigmoidDenseBasicNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, false, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseLogNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, false, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseMinusNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, false, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseLogMinusNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, false, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseBasicNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, true, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseLogNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, true, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseMinusNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, true, false, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseLogMinusNoRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, true, false, ExecType.CP);
 	}
 	//with rewrites

 	@Test
 	public void testSigmoidDenseBasicRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, false, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseLogRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, false, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseMinusRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, false, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseLogMinusRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, false, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseBasicRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, true, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseLogRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, true, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseMinusRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, true, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidSparseLogMinusRewritesCP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, true, true, ExecType.CP);
 	}

 	@Test
 	public void testSigmoidDenseBasicRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, false, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseLogRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, false, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseMinusRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, false, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseLogMinusRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, false, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseBasicRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseLogRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseMinusRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseLogMinusRewritesSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, true, true, ExecType.SPARK);
 	}


 	@Test
 	public void testSigmoidSparseBasicRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, true, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseLogRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, true, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseMinusRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, true, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidSparseLogMinusRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, true, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseBasicRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME1, false, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseLogRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME2, false, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseMinusRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME3, false, true, true, ExecType.SPARK);
 	}

 	@Test
 	public void testSigmoidDenseLogMinusRewritesRepSP()
 	{
 		runMLUnaryBuiltinTest(TEST_NAME4, false, true, true, ExecType.SPARK);
 	}


 	/**
 	 *
 	 * @param testname
 	 * @param sparse
 	 * @param rewrites
 	 * @param instType
 	 */
 	private void runMLUnaryBuiltinTest( String testname, boolean sparse, boolean rewrites, ExecType instType)
 	{
 		runMLUnaryBuiltinTest(testname, sparse, rewrites, false, instType);
 	}

 	private void runMLUnaryBuiltinTest( String testname, boolean sparse, boolean rewrites, boolean rep, ExecType instType)
 	{
 		ExecMode platformOld = rtplatform;
 		switch( instType ){
 			case SPARK: rtplatform = ExecMode.SPARK; break;
 			default: rtplatform = ExecMode.HYBRID; break;
 		}

 		boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG;
 		if( rtplatform == ExecMode.SPARK )
 			DMLScript.USE_LOCAL_SPARK_CONFIG = true;

 		boolean rewritesOld = OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION;
 		boolean forceOld = QuaternaryOp.FORCE_REPLICATION;

 		OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewrites;
 		QuaternaryOp.FORCE_REPLICATION = rep;

 		try
 		{
 			double sparsity = (sparse) ? spSparse : spDense;
 			String TEST_NAME = testname;

 			TestConfiguration config = getTestConfiguration(TEST_NAME);

 			String TEST_CACHE_DIR = "";
 			if (TEST_CACHE_ENABLED)
 			{
 				TEST_CACHE_DIR = TEST_NAME + "_" + sparsity + "/";
 			}

 			loadTestConfiguration(config, TEST_CACHE_DIR);

 			// This is for running the junit test the new way, i.e., construct the arguments directly
 			String HOME = SCRIPT_DIR + TEST_DIR;
 			fullDMLScriptName = HOME + TEST_NAME + ".dml";
 			programArgs = new String[]{"-stats", "-explain", "runtime", "-args",
 				input("X"), input("U"), input("V"), input("W"), output("R") };

 			fullRScriptName = HOME + TEST_NAME + ".R";
 			rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + expectedDir();

 			//generate actual dataset
 			double[][] X = getRandomMatrix(rows, cols, 0, 1, sparsity, 7);
 			writeInputMatrixWithMTD("X", X, true);
 			double[][] U = getRandomMatrix(rows, rank, 0, 1, 1.0, 213);
 			writeInputMatrixWithMTD("U", U, true);
 			double[][] V = getRandomMatrix(cols, rank, 0, 1, 1.0, 312);
 			writeInputMatrixWithMTD("V", V, true);

 			runTest(true, false, null, -1);
 			runRScript(true);

 			//compare matrices
 			HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromOutputDir("R");
 			HashMap<CellIndex, Double> rfile  = readRMatrixFromExpectedDir("R");
 			TestUtils.compareMatrices(dmlfile, rfile, eps, "Stat-DML", "Stat-R");
 			checkDMLMetaDataFile("R", new MatrixCharacteristics(rows,cols,1,1));

 			//check statistics for right operator in cp
 			if( instType == ExecType.CP && rewrites )
 				Assert.assertTrue(Statistics.getCPHeavyHitterOpCodes().contains(WeightedSigmoid.OPCODE_CP));
 		}
 		finally
 		{
 			rtplatform = platformOld;
 			DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld;
 			OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewritesOld;
 			QuaternaryOp.FORCE_REPLICATION = forceOld;
 		}
 	}
 }
	/*
	* Licensed to the Apache Software Foundation (ASF) under one
	* or more contributor license agreements. See the NOTICE file
	* distributed with this work for additional information
	* regarding copyright ownership. The ASF licenses this file
	* to you under the Apache License, Version 2.0 (the
	* "License"); you may not use this file except in compliance
	* with the License. You may obtain a copy of the License at
	*
	* http://www.apache.org/licenses/LICENSE-2.0
	*
	* Unless required by applicable law or agreed to in writing,
	* software distributed under the License is distributed on an
	* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
	* KIND, either express or implied. See the License for the
	* specific language governing permissions and limitations
	* under the License.
	*/

	package org.apache.sysds.test.functions.quaternary;

	import java.util.HashMap;

	import org.junit.AfterClass;
	import org.junit.Assert;
	import org.junit.BeforeClass;
	import org.junit.Test;
	import org.apache.sysds.api.DMLScript;
	import org.apache.sysds.common.Types.ExecMode;
	import org.apache.sysds.hops.OptimizerUtils;
	import org.apache.sysds.hops.QuaternaryOp;
	import org.apache.sysds.lops.WeightedSigmoid;
	import org.apache.sysds.lops.LopProperties.ExecType;
	import org.apache.sysds.runtime.matrix.data.MatrixValue.CellIndex;
	import org.apache.sysds.runtime.meta.MatrixCharacteristics;
	import org.apache.sysds.test.AutomatedTestBase;
	import org.apache.sysds.test.TestConfiguration;
	import org.apache.sysds.test.TestUtils;
	import org.apache.sysds.utils.Statistics;

	/**
	*
	*
	*/
	public class WeightedSigmoidTest extends AutomatedTestBase
	{

	private final static String TEST_NAME1 = "WeightedSigmoidP1";
	private final static String TEST_NAME2 = "WeightedSigmoidP2";
	private final static String TEST_NAME3 = "WeightedSigmoidP3";
	private final static String TEST_NAME4 = "WeightedSigmoidP4";

	private final static String TEST_DIR = "functions/quaternary/";
	private final static String TEST_CLASS_DIR = TEST_DIR + WeightedSigmoidTest.class.getSimpleName() + "/";

	private final static double eps = 1e-10;

	private final static int rows = 1201;
	private final static int cols = 1103;
	private final static int rank = 10;
	private final static double spSparse = 0.001;
	private final static double spDense = 0.6;

	@Override
	public void setUp()
	{
	TestUtils.clearAssertionInformation();
	addTestConfiguration(TEST_NAME1,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME1,new String[]{"R"}));
	addTestConfiguration(TEST_NAME2,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME2,new String[]{"R"}));
	addTestConfiguration(TEST_NAME3,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME3,new String[]{"R"}));
	addTestConfiguration(TEST_NAME4,new TestConfiguration(TEST_CLASS_DIR, TEST_NAME4,new String[]{"R"}));

	if (TEST_CACHE_ENABLED) {
	setOutAndExpectedDeletionDisabled(true);
	}
	}

	@BeforeClass
	public static void init()
	{
	TestUtils.clearDirectory(TEST_DATA_DIR + TEST_CLASS_DIR);
	}

	@AfterClass
	public static void cleanUp()
	{
	if (TEST_CACHE_ENABLED) {
	TestUtils.clearDirectory(TEST_DATA_DIR + TEST_CLASS_DIR);
	}
	}

	@Test
	public void testSigmoidDenseBasicNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, false, false, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseLogNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, false, false, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseMinusNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, false, false, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseLogMinusNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, false, false, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseBasicNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, true, false, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseLogNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, true, false, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseMinusNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, true, false, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseLogMinusNoRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, true, false, ExecType.CP);
	}
	//with rewrites

	@Test
	public void testSigmoidDenseBasicRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, false, true, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseLogRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, false, true, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseMinusRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, false, true, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseLogMinusRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, false, true, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseBasicRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, true, true, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseLogRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, true, true, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseMinusRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, true, true, ExecType.CP);
	}

	@Test
	public void testSigmoidSparseLogMinusRewritesCP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, true, true, ExecType.CP);
	}

	@Test
	public void testSigmoidDenseBasicRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, false, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseLogRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, false, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseMinusRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, false, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseLogMinusRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, false, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseBasicRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseLogRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseMinusRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseLogMinusRewritesSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, true, true, ExecType.SPARK);
	}


	@Test
	public void testSigmoidSparseBasicRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, true, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseLogRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, true, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseMinusRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, true, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidSparseLogMinusRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, true, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseBasicRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME1, false, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseLogRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME2, false, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseMinusRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME3, false, true, true, ExecType.SPARK);
	}

	@Test
	public void testSigmoidDenseLogMinusRewritesRepSP()
	{
	runMLUnaryBuiltinTest(TEST_NAME4, false, true, true, ExecType.SPARK);
	}


	/**
	*
	* @param testname
	* @param sparse
	* @param rewrites
	* @param instType
	*/
	private void runMLUnaryBuiltinTest( String testname, boolean sparse, boolean rewrites, ExecType instType)
	{
	runMLUnaryBuiltinTest(testname, sparse, rewrites, false, instType);
	}

	private void runMLUnaryBuiltinTest( String testname, boolean sparse, boolean rewrites, boolean rep, ExecType instType)
	{
	ExecMode platformOld = rtplatform;
	switch( instType ){
	case SPARK: rtplatform = ExecMode.SPARK; break;
	default: rtplatform = ExecMode.HYBRID; break;
	}

	boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG;
	if( rtplatform == ExecMode.SPARK )
	DMLScript.USE_LOCAL_SPARK_CONFIG = true;

	boolean rewritesOld = OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION;
	boolean forceOld = QuaternaryOp.FORCE_REPLICATION;

	OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewrites;
	QuaternaryOp.FORCE_REPLICATION = rep;

	try
	{
	double sparsity = (sparse) ? spSparse : spDense;
	String TEST_NAME = testname;

	TestConfiguration config = getTestConfiguration(TEST_NAME);

	String TEST_CACHE_DIR = "";
	if (TEST_CACHE_ENABLED)
	{
	TEST_CACHE_DIR = TEST_NAME + "_" + sparsity + "/";
	}

	loadTestConfiguration(config, TEST_CACHE_DIR);

	// This is for running the junit test the new way, i.e., construct the arguments directly
	String HOME = SCRIPT_DIR + TEST_DIR;
	fullDMLScriptName = HOME + TEST_NAME + ".dml";
	programArgs = new String[]{"-stats", "-explain", "runtime", "-args",
	input("X"), input("U"), input("V"), input("W"), output("R") };

	fullRScriptName = HOME + TEST_NAME + ".R";
	rCmd = "Rscript" + " " + fullRScriptName + " " + inputDir() + " " + expectedDir();

	//generate actual dataset
	double[][] X = getRandomMatrix(rows, cols, 0, 1, sparsity, 7);
	writeInputMatrixWithMTD("X", X, true);
	double[][] U = getRandomMatrix(rows, rank, 0, 1, 1.0, 213);
	writeInputMatrixWithMTD("U", U, true);
	double[][] V = getRandomMatrix(cols, rank, 0, 1, 1.0, 312);
	writeInputMatrixWithMTD("V", V, true);

	runTest(true, false, null, -1);
	runRScript(true);

	//compare matrices
	HashMap<CellIndex, Double> dmlfile = readDMLMatrixFromOutputDir("R");
	HashMap<CellIndex, Double> rfile = readRMatrixFromExpectedDir("R");
	TestUtils.compareMatrices(dmlfile, rfile, eps, "Stat-DML", "Stat-R");
	checkDMLMetaDataFile("R", new MatrixCharacteristics(rows,cols,1,1));

	//check statistics for right operator in cp
	if( instType == ExecType.CP && rewrites )
	Assert.assertTrue(Statistics.getCPHeavyHitterOpCodes().contains(WeightedSigmoid.OPCODE_CP));
	}
	finally
	{
	rtplatform = platformOld;
	DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld;
	OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewritesOld;
	QuaternaryOp.FORCE_REPLICATION = forceOld;
	}
	}
	}