| /* |
| * Licensed to the Apache Software Foundation (ASF) under one |
| * or more contributor license agreements. See the NOTICE file |
| * distributed with this work for additional information |
| * regarding copyright ownership. The ASF licenses this file |
| * to you under the Apache License, Version 2.0 (the |
| * "License"); you may not use this file except in compliance |
| * with the License. You may obtain a copy of the License at |
| * |
| * http://www.apache.org/licenses/LICENSE-2.0 |
| * |
| * Unless required by applicable law or agreed to in writing, |
| * software distributed under the License is distributed on an |
| * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY |
| * KIND, either express or implied. See the License for the |
| * specific language governing permissions and limitations |
| * under the License. |
| */ |
| |
| package org.apache.sysds.test.functions.codegenalg.partone; |
| |
| import java.io.File; |
| import java.util.HashMap; |
| |
| import org.apache.sysds.runtime.matrix.data.MatrixValue; |
| import org.junit.Assert; |
| import org.junit.Test; |
| import org.apache.sysds.api.DMLScript; |
| import org.apache.sysds.common.Types.ExecMode; |
| import org.apache.sysds.hops.OptimizerUtils; |
| import org.apache.sysds.lops.LopProperties.ExecType; |
| import org.apache.sysds.test.AutomatedTestBase; |
| import org.apache.sysds.test.TestConfiguration; |
| import org.apache.sysds.test.TestUtils; |
| |
| public class AlgorithmAutoEncoder extends AutomatedTestBase |
| { |
| private final static String TEST_NAME1 = "Algorithm_AutoEncoder"; |
| private final static String TEST_DIR = "functions/codegenalg/"; |
| private final static String TEST_CLASS_DIR = TEST_DIR + AlgorithmAutoEncoder.class.getSimpleName() + "/"; |
| |
| private final static int rows = 1068; |
| private final static int cols = 784; |
| |
| private final static double sparsity1 = 0.7; //dense |
| private final static double sparsity2 = 0.1; //sparse |
| private final static double eps = 1e-5; |
| |
| private final static int H1 = 500; |
| private final static int H2 = 2; |
| private final static double epochs = 2; |
| |
| private CodegenTestType currentTestType = CodegenTestType.DEFAULT; |
| |
| @Override |
| public void setUp() { |
| TestUtils.clearAssertionInformation(); |
| addTestConfiguration(TEST_NAME1, new TestConfiguration(TEST_CLASS_DIR, TEST_NAME1, new String[] { "w" })); |
| } |
| |
| //Note: limited cases for SPARK, as lazy evaluation |
| //causes very long execution time for this algorithm |
| |
| @Test |
| public void testAutoEncoder256DenseCP() { |
| runAutoEncoderTest(256, false, false, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder256DenseRewritesCP() { |
| runAutoEncoderTest(256, false, true, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder256SparseCP() { |
| runAutoEncoderTest(256, true, false, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder256SparseRewritesCP() { |
| runAutoEncoderTest(256, true, true, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseCP() { |
| runAutoEncoderTest(512, false, false, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesCP() { |
| runAutoEncoderTest(512, false, true, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseCP() { |
| runAutoEncoderTest(512, true, false, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesCP() { |
| runAutoEncoderTest(512, true, true, ExecType.CP, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder256DenseRewritesSpark() { |
| runAutoEncoderTest(256, false, true, ExecType.SPARK, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder256SparseRewritesSpark() { |
| runAutoEncoderTest(256, true, true, ExecType.SPARK, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesSpark() { |
| runAutoEncoderTest(512, false, true, ExecType.SPARK, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesSpark() { |
| runAutoEncoderTest(512, true, true, ExecType.SPARK, CodegenTestType.DEFAULT); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesCPFuseAll() { |
| runAutoEncoderTest(512, false, true, ExecType.CP, CodegenTestType.FUSE_ALL); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesCPFuseAll() { |
| runAutoEncoderTest(512, true, true, ExecType.CP, CodegenTestType.FUSE_ALL); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesSparkFuseAll() { |
| runAutoEncoderTest(512, false, true, ExecType.SPARK, CodegenTestType.FUSE_ALL); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesSparkFuseAll() { |
| runAutoEncoderTest(512, true, true, ExecType.SPARK, CodegenTestType.FUSE_ALL); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesCPFuseNoRedundancy() { |
| runAutoEncoderTest(512, false, true, ExecType.CP, CodegenTestType.FUSE_NO_REDUNDANCY); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesCPFuseNoRedundancy() { |
| runAutoEncoderTest(512, true, true, ExecType.CP, CodegenTestType.FUSE_NO_REDUNDANCY); |
| } |
| |
| @Test |
| public void testAutoEncoder512DenseRewritesSparkFuseNoRedundancy() { |
| runAutoEncoderTest(512, false, true, ExecType.SPARK, CodegenTestType.FUSE_NO_REDUNDANCY); |
| } |
| |
| @Test |
| public void testAutoEncoder512SparseRewritesSparkFuseNoRedundancy() { |
| runAutoEncoderTest(512, true, true, ExecType.SPARK, CodegenTestType.FUSE_NO_REDUNDANCY); |
| } |
| |
| private void runAutoEncoderTest(int batchsize, boolean sparse, boolean rewrites, ExecType instType, CodegenTestType CodegenTestType) |
| { |
| boolean oldFlag = OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION; |
| ExecMode platformOld = rtplatform; |
| switch( instType ){ |
| case SPARK: rtplatform = ExecMode.SPARK; break; |
| default: rtplatform = ExecMode.HYBRID; break; |
| } |
| |
| currentTestType = CodegenTestType; |
| |
| boolean sparkConfigOld = DMLScript.USE_LOCAL_SPARK_CONFIG; |
| if( rtplatform == ExecMode.SPARK || rtplatform == ExecMode.HYBRID ) |
| DMLScript.USE_LOCAL_SPARK_CONFIG = true; |
| |
| try |
| { |
| String TEST_NAME = TEST_NAME1; |
| TestConfiguration config = getTestConfiguration(TEST_NAME); |
| loadTestConfiguration(config); |
| |
| fullDMLScriptName = SCRIPT_DIR + TEST_DIR + "/Algorithm_AutoEncoder.dml"; |
| //"scripts/staging/autoencoder-2layer.dml"; |
| programArgs = new String[]{ "-stats", "-nvargs", "X="+input("X"), |
| "H1="+H1, "H2="+H2, "EPOCH="+epochs, "BATCH="+batchsize, |
| "W1_rand="+input("W1_rand"),"W2_rand="+input("W2_rand"), |
| "W3_rand="+input("W3_rand"), "W4_rand="+input("W4_rand"), |
| "order_rand="+input("order_rand"), |
| "W1_out="+output("W1"), "b1_out="+output("b1"), |
| "W2_out="+output("W2"), "b2_out="+output("b2"), |
| "W3_out="+output("W3"), "b3_out="+output("b3"), |
| "W4_out="+output("W4"), "b4_out="+output("b4")}; |
| |
| rCmd = getRCmd(inputDir(), String.valueOf(H1), String.valueOf(H2), |
| String.valueOf(epochs), String.valueOf(batchsize), expectedDir()); |
| OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = rewrites; |
| |
| //generate actual datasets |
| double[][] X = getRandomMatrix(rows, cols, 0, 1, sparse?sparsity2:sparsity1, 714); |
| writeInputMatrixWithMTD("X", X, true); |
| |
| //generate rand matrices for W1, W2, W3, W4 here itself for passing onto both DML and R scripts |
| double[][] W1_rand = getRandomMatrix(H1, cols, 0, 1, sparse?sparsity2:sparsity1, 800); |
| writeInputMatrixWithMTD("W1_rand", W1_rand, true); |
| double[][] W2_rand = getRandomMatrix(H2, H1, 0, 1, sparse?sparsity2:sparsity1, 900); |
| writeInputMatrixWithMTD("W2_rand", W2_rand, true); |
| double[][] W3_rand = getRandomMatrix(H1, H2, 0, 1, sparse?sparsity2:sparsity1, 589); |
| writeInputMatrixWithMTD("W3_rand", W3_rand, true); |
| double[][] W4_rand = getRandomMatrix(cols, H1, 0, 1, sparse?sparsity2:sparsity1, 150); |
| writeInputMatrixWithMTD("W4_rand", W4_rand, true); |
| double[][] order_rand = getRandomMatrix(rows, 1, 0, 1, sparse?sparsity2:sparsity1, 143); |
| writeInputMatrixWithMTD("order_rand", order_rand, true); //for the permut operation on input X |
| |
| //run script |
| runTest(true, false, null, -1); |
| runRScript(true); |
| |
| HashMap<MatrixValue.CellIndex, Double> dmlW1 = readDMLMatrixFromOutputDir("W1"); |
| HashMap<MatrixValue.CellIndex, Double> dmlW2 = readDMLMatrixFromOutputDir("W2"); |
| HashMap<MatrixValue.CellIndex, Double> dmlW3 = readDMLMatrixFromOutputDir("W3"); |
| HashMap<MatrixValue.CellIndex, Double> dmlW4 = readDMLMatrixFromOutputDir("W4"); |
| HashMap<MatrixValue.CellIndex, Double> dmlb1 = readDMLMatrixFromOutputDir("b1"); |
| HashMap<MatrixValue.CellIndex, Double> dmlb2 = readDMLMatrixFromOutputDir("b2"); |
| HashMap<MatrixValue.CellIndex, Double> dmlb3 = readDMLMatrixFromOutputDir("b3"); |
| HashMap<MatrixValue.CellIndex, Double> dmlb4 = readDMLMatrixFromOutputDir("b4"); |
| HashMap<MatrixValue.CellIndex, Double> rW1 = readRMatrixFromExpectedDir("W1"); |
| HashMap<MatrixValue.CellIndex, Double> rW2 = readRMatrixFromExpectedDir("W2"); |
| HashMap<MatrixValue.CellIndex, Double> rW3 = readRMatrixFromExpectedDir("W3"); |
| HashMap<MatrixValue.CellIndex, Double> rW4 = readRMatrixFromExpectedDir("W4"); |
| HashMap<MatrixValue.CellIndex, Double> rb1 = readRMatrixFromExpectedDir("b1"); |
| HashMap<MatrixValue.CellIndex, Double> rb2 = readRMatrixFromExpectedDir("b2"); |
| HashMap<MatrixValue.CellIndex, Double> rb3 = readRMatrixFromExpectedDir("b3"); |
| HashMap<MatrixValue.CellIndex, Double> rb4 = readRMatrixFromExpectedDir("b4"); |
| TestUtils.compareMatrices(dmlW1, rW1, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlW2, rW2, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlW3, rW3, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlW4, rW4, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlb1, rb1, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlb2, rb2, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlb3, rb3, eps, "Stat-DML", "Stat-R"); |
| TestUtils.compareMatrices(dmlb4, rb4, eps, "Stat-DML", "Stat-R"); |
| |
| Assert.assertTrue(heavyHittersContainsSubString("spoof") |
| || heavyHittersContainsSubString("sp_spoof")); |
| } |
| finally { |
| rtplatform = platformOld; |
| DMLScript.USE_LOCAL_SPARK_CONFIG = sparkConfigOld; |
| OptimizerUtils.ALLOW_ALGEBRAIC_SIMPLIFICATION = oldFlag; |
| OptimizerUtils.ALLOW_AUTO_VECTORIZATION = true; |
| OptimizerUtils.ALLOW_OPERATOR_FUSION = true; |
| } |
| } |
| |
| /** |
| * Override default configuration with custom test configuration to ensure |
| * scratch space and local temporary directory locations are also updated. |
| */ |
| @Override |
| protected File getConfigTemplateFile() { |
| return getCodegenConfigFile(SCRIPT_DIR + TEST_DIR, currentTestType); |
| } |
| } |