| /* |
| * Licensed to the Apache Software Foundation (ASF) under one |
| * or more contributor license agreements. See the NOTICE file |
| * distributed with this work for additional information |
| * regarding copyright ownership. The ASF licenses this file |
| * to you under the Apache License, Version 2.0 (the |
| * "License"); you may not use this file except in compliance |
| * with the License. You may obtain a copy of the License at |
| * |
| * http://www.apache.org/licenses/LICENSE-2.0 |
| * |
| * Unless required by applicable law or agreed to in writing, |
| * software distributed under the License is distributed on an |
| * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY |
| * KIND, either express or implied. See the License for the |
| * specific language governing permissions and limitations |
| * under the License. |
| */ |
| |
| package org.apache.sysds.runtime.io; |
| |
| import org.apache.hadoop.fs.FileSystem; |
| import org.apache.hadoop.fs.Path; |
| import org.apache.hadoop.io.LongWritable; |
| import org.apache.hadoop.io.Text; |
| import org.apache.hadoop.mapred.*; |
| import org.apache.wink.json4j.JSONArray; |
| import org.apache.wink.json4j.JSONException; |
| import org.apache.wink.json4j.JSONObject; |
| import org.apache.sysds.common.Types; |
| import org.apache.sysds.conf.ConfigurationManager; |
| import org.apache.sysds.runtime.DMLRuntimeException; |
| import org.apache.sysds.runtime.matrix.data.FrameBlock; |
| import org.apache.sysds.runtime.util.UtilFunctions; |
| |
| import java.io.IOException; |
| import java.util.Map; |
| |
| import static org.apache.sysds.runtime.io.FrameReader.*; |
| |
| |
| public class FrameReaderJSONL |
| { |
| public FrameBlock readFrameFromHDFS(String fname, Types.ValueType[] schema, Map<String, Integer> schemaMap, |
| long rlen, long clen) throws IOException, DMLRuntimeException, JSONException |
| { |
| //prepare file access |
| JobConf jobConf = new JobConf(ConfigurationManager.getCachedJobConf()); |
| Path path = new Path(fname); |
| FileSystem fileSystem = IOUtilFunctions.getFileSystem(path, jobConf); |
| FileInputFormat.addInputPath(jobConf, path); |
| |
| //check existence and non-empty file |
| checkValidInputFile(fileSystem, path); |
| |
| |
| Types.ValueType[] lschema = createOutputSchema(schema, clen); |
| String[] lnames = createOutputNamesFromSchemaMap(schemaMap); |
| FrameBlock ret = createOutputFrameBlock(lschema, lnames, rlen); |
| |
| readJSONLFrameFromHDFS(path, jobConf, fileSystem, ret, schema, schemaMap); |
| return ret; |
| } |
| |
| |
| protected void readJSONLFrameFromHDFS(Path path, JobConf jobConf, FileSystem fileSystem, FrameBlock dest, |
| Types.ValueType[] schema, Map<String, Integer> schemaMap) throws IOException, JSONException |
| { |
| TextInputFormat inputFormat = new TextInputFormat(); |
| inputFormat.configure(jobConf); |
| InputSplit[] splits = inputFormat.getSplits(jobConf, 1); |
| splits = IOUtilFunctions.sortInputSplits(splits); |
| |
| for (int i = 0, rowPos = 0; i < splits.length; i++) { |
| rowPos = readJSONLFrameFromInputSplit(splits[i], inputFormat, jobConf, schema, schemaMap, dest, rowPos); |
| } |
| } |
| |
| |
| protected static int readJSONLFrameFromInputSplit(InputSplit split, InputFormat<LongWritable, Text> inputFormat, |
| JobConf jobConf, Types.ValueType[] schema, Map<String, Integer> schemaMap, FrameBlock dest, int currentRow) |
| throws IOException, JSONException |
| { |
| RecordReader<LongWritable, Text> reader = inputFormat.getRecordReader(split, jobConf, Reporter.NULL); |
| LongWritable key = new LongWritable(); |
| Text value = new Text(); |
| |
| int row = currentRow; |
| try { |
| while (reader.next(key, value)) { |
| // Potential Problem if JSON/L Object is very large |
| JSONObject jsonObject = new JSONObject(value.toString()); |
| for (Map.Entry<String, Integer> entry : schemaMap.entrySet()) { |
| String strCellValue = getStringFromJSONPath(jsonObject, entry.getKey()); |
| dest.set(row, entry.getValue(), UtilFunctions.stringToObject(schema[entry.getValue()], strCellValue)); |
| } |
| row++; |
| } |
| } |
| finally { |
| IOUtilFunctions.closeSilently(reader); |
| } |
| return row; |
| } |
| // TODO Needs Optimisation! "split" is inefficient |
| private static String getStringFromJSONPath(JSONObject jsonObject, String path) |
| throws IOException |
| { |
| String[] splitPath = path.split("/"); |
| Object temp = null; |
| for (String split : splitPath) { |
| if(split.equals("")) continue; |
| try{ |
| if (temp == null) { |
| temp = jsonObject.get(split); |
| } else if (temp instanceof JSONObject) { |
| temp = ((JSONObject) temp).get(split); |
| } else if (temp instanceof JSONArray) { |
| throw new IOException("Cannot traverse JSON Array in a meaningful manner"); |
| } else { |
| return null; |
| } |
| } |
| catch (JSONException e){ |
| // Value not in JsonObject |
| return null; |
| } |
| |
| } |
| if(temp == null){ |
| throw new IOException("Could not traverse the JSON path: '" + path + "'!"); |
| } |
| return temp.toString(); |
| } |
| |
| |
| private static String[] createOutputNamesFromSchemaMap(Map<String, Integer> schemaMap) { |
| String[] names = new String[schemaMap.size()]; |
| schemaMap.forEach((key, value) -> names[value] = key); |
| return names; |
| } |
| } |