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<book version="5.0" xmlns="http://docbook.org/ns/docbook"
xmlns:xlink="http://www.w3.org/1999/xlink"
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<info>
<title>The Apache <link xlink:href="http://www.hbase.org">HBase</link>
Book</title>
<copyright><year>2010</year><holder>Apache Software Foundation</holder></copyright>
<abstract>
<para>This is the official book of
<link xlink:href="http://www.hbase.org">Apache HBase</link>,
a distributed, versioned, column-oriented database built on top of
<link xlink:href="http://hadoop.apache.org/">Apache Hadoop</link> and
<link xlink:href="http://zookeeper.apache.org/">Apache ZooKeeper</link>.
</para>
</abstract>
<revhistory>
<revision>
<date />
<revdescription>Adding first cuts at Configuration, Getting Started, Data Model</revdescription>
<revnumber>
<?eval ${project.version}?>
</revnumber>
</revision>
<revision>
<date>
5 October 2010
</date>
<authorinitials>stack</authorinitials>
<revdescription>Initial layout</revdescription>
<revnumber>
0.89.20100924
</revnumber>
</revision>
</revhistory>
</info>
<preface xml:id="preface">
<title>Preface</title>
<para>This book aims to be the official guide for the <link
xlink:href="http://hbase.apache.org/">HBase</link> version it ships with.
This document describes HBase version <emphasis><?eval ${project.version}?></emphasis>.
Herein you will find either the definitive documentation on an HBase topic
as of its standing when the referenced HBase version shipped, or
this book will point to the location in <link
xlink:href="http://hbase.apache.org/docs/current/api/index.html">javadoc</link>,
<link xlink:href="https://issues.apache.org/jira/browse/HBASE">JIRA</link>
or <link xlink:href="http://wiki.apache.org/hadoop/Hbase">wiki</link>
where the pertinent information can be found.</para>
<para>This book is a work in progress. It is lacking in many areas but we
hope to fill in the holes with time. Feel free to add to this book should
by adding a patch to an issue up in the HBase <link
xlink:href="https://issues.apache.org/jira/browse/HBASE">JIRA</link>.</para>
</preface>
<chapter xml:id="getting_started">
<title>Getting Started</title>
<section >
<title>Introduction</title>
<para>
<link linkend="quickstart">Quick Start</link> will get you up and running
on a single-node instance of HBase using the local filesystem.
The <link linkend="notsoquick">Not-so-quick Start Guide</link>
describes setup of HBase in distributed mode running on top of HDFS.
</para>
</section>
<section xml:id="quickstart">
<title>Quick Start</title>
<para>This guide describes setup of a standalone HBase
instance that uses the local filesystem. It leads you
through creating a table, inserting rows via the
<link linkend="shell">HBase Shell</link>, and then cleaning up and shutting
down your standalone HBase instance.
The below exercise should take no more than
ten minutes (not including download time).
</para>
<section>
<title>Download and unpack the latest stable release.</title>
<para>Choose a download site from this list of <link
xlink:href="http://www.apache.org/dyn/closer.cgi/hbase/">Apache
Download Mirrors</link>. Click on suggested top link. This will take you to a
mirror of <emphasis>HBase Releases</emphasis>. Click on
the folder named <filename>stable</filename> and then download the
file that ends in <filename>.tar.gz</filename> to your local filesystem;
e.g. <filename>hbase-<?eval ${project.version}?>.tar.gz</filename>.</para>
<para>Decompress and untar your download and then change into the
unpacked directory.</para>
<para><programlisting>$ tar xfz hbase-<?eval ${project.version}?>.tar.gz
$ cd hbase-<?eval ${project.version}?>
</programlisting></para>
<para>
At this point, you are ready to start HBase. But before starting it,
you might want to edit <filename>conf/hbase-site.xml</filename>
and set the directory you want HBase to write to,
<varname>hbase.rootdir</varname>.
<programlisting>
<![CDATA[
<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
<configuration>
<property>
<name>hbase.rootdir</name>
<value>file:///DIRECTORY/hbase</value>
</property>
</configuration>
]]>
</programlisting>
Replace <varname>DIRECTORY</varname> in the above with a path to a directory where you want
HBase to store its data. By default, <varname>hbase.rootdir</varname> is
set to <filename>/tmp/hbase-${user.name}</filename>
which means you'll lose all your data whenever your server reboots
(Most operating systems clear <filename>/tmp</filename> on restart).
</para>
</section>
<section xml:id="start_hbase">
<title>Start HBase</title>
<para>Now start HBase:<programlisting>$ ./bin/start-hbase.sh
starting Master, logging to logs/hbase-user-master-example.org.out</programlisting></para>
<para>You should
now have a running standalone HBase instance. In standalone mode, HBase runs
all daemons in the the one JVM; i.e. both the HBase and ZooKeeper daemons.
HBase logs can be found in the <filename>logs</filename> subdirectory. Check them
out especially if HBase had trouble starting.</para>
<note>
<title>Is <application>java</application> installed?</title>
<para>All of the above presumes a 1.6 version of Oracle
<application>java</application> is installed on your
machine and available on your path; i.e. when you type
<application>java</application>, you see output that describes the options
the java program takes (HBase requires java 6). If this is
not the case, HBase will not start.
Install java, edit <filename>conf/hbase-env.sh</filename>, uncommenting the
<envar>JAVA_HOME</envar> line pointing it to your java install. Then,
retry the steps above.</para>
</note>
</section>
<section xml:id="shell_exercises">
<title>Shell Exercises</title>
<para>Connect to your running HBase via the
<link linkend="shell">HBase Shell</link>.</para>
<para><programlisting>$ ./bin/hbase shell
HBase Shell; enter 'help&lt;RETURN&gt;' for list of supported commands.
Type "exit&lt;RETURN&gt;" to leave the HBase Shell
Version: 0.89.20100924, r1001068, Fri Sep 24 13:55:42 PDT 2010
hbase(main):001:0&gt; </programlisting></para>
<para>Type <command>help</command> and then <command>&lt;RETURN&gt;</command>
to see a listing of shell
commands and options. Browse at least the paragraphs at the end of
the help emission for the gist of how variables and command
arguments are entered into the
HBase shell; in particular note how table names, rows, and
columns, etc., must be quoted.</para>
<para>Create a table named <varname>test</varname> with a single
<link linkend="columnfamily">column family</link> named <varname>cf</varname>.
Verify its creation by listing all tables and then insert some
values.</para>
<para><programlisting>hbase(main):003:0&gt; create 'test', 'cf'
0 row(s) in 1.2200 seconds
hbase(main):003:0&gt; list 'table'
test
1 row(s) in 0.0550 seconds
hbase(main):004:0&gt; put 'test', 'row1', 'cf:a', 'value1'
0 row(s) in 0.0560 seconds
hbase(main):005:0&gt; put 'test', 'row2', 'cf:b', 'value2'
0 row(s) in 0.0370 seconds
hbase(main):006:0&gt; put 'test', 'row3', 'cf:c', 'value3'
0 row(s) in 0.0450 seconds</programlisting></para>
<para>Above we inserted 3 values, one at a time. The first insert is at
<varname>row1</varname>, column <varname>cf:a</varname> with a value of
<varname>value1</varname>.
Columns in HBase are comprised of a
<link linkend="columnfamily">column family</link> prefix
-- <varname>cf</varname> in this example -- followed by
a colon and then a column qualifier suffix (<varname>a</varname> in this case).
</para>
<para>Verify the data insert.</para>
<para>Run a scan of the table by doing the following</para>
<para><programlisting>hbase(main):007:0&gt; scan 'test'
ROW COLUMN+CELL
row1 column=cf:a, timestamp=1288380727188, value=value1
row2 column=cf:b, timestamp=1288380738440, value=value2
row3 column=cf:c, timestamp=1288380747365, value=value3
3 row(s) in 0.0590 seconds</programlisting></para>
<para>Get a single row as follows</para>
<para><programlisting>hbase(main):008:0&gt; get 'test', 'row1'
COLUMN CELL
cf:a timestamp=1288380727188, value=value1
1 row(s) in 0.0400 seconds</programlisting></para>
<para>Now, disable and drop your table. This will clean up all
done above.</para>
<para><programlisting>hbase(main):012:0&gt; disable 'test'
0 row(s) in 1.0930 seconds
hbase(main):013:0&gt; drop 'test'
0 row(s) in 0.0770 seconds </programlisting></para>
<para>Exit the shell by typing exit.</para>
<para><programlisting>hbase(main):014:0&gt; exit</programlisting></para>
</section>
<section>
<title>Stopping HBase</title>
<para>Stop your hbase instance by running the stop script.</para>
<para><programlisting>$ ./bin/stop-hbase.sh
stopping hbase...............</programlisting></para>
</section>
<section><title>Where to go next
</title>
<para>The above described standalone setup is good for testing and experiments only.
Move on to the next section, the <link linkend="notsoquick">Not-so-quick Start Guide</link>
where we'll go into depth on the different HBase run modes, requirements and critical
configurations needed setting up a distributed HBase deploy.
</para>
</section>
</section>
<section xml:id="notsoquick">
<title>Not-so-quick Start Guide</title>
<section xml:id="requirements"><title>Requirements</title>
<para>HBase has the following requirements. Please read the
section below carefully and ensure that all requirements have been
satisfied. Failure to do so will cause you (and us) grief debugging
strange errors and/or data loss.
</para>
<section xml:id="java"><title>java</title>
<para>
Just like Hadoop, HBase requires java 6 from <link xlink:href="http://www.java.com/download/">Oracle</link>.
Usually you'll want to use the latest version available except the problematic u18 (u22 is the latest version as of this writing).</para>
</section>
<section xml:id="hadoop"><title><link xlink:href="http://hadoop.apache.org">hadoop</link></title>
<para>This version of HBase will only run on <link xlink:href="http://hadoop.apache.org/common/releases.html">Hadoop 0.20.x</link>.
It will not run on hadoop 0.21.x (nor 0.22.x) as of this writing.
HBase will lose data unless it is running on an HDFS that has a durable <code>sync</code>.
Currently only the <link xlink:href="http://svn.apache.org/viewvc/hadoop/common/branches/branch-0.20-append/">branch-0.20-append</link>
branch has this attribute. No official releases have been made from this branch as of this writing
so you will have to build your own Hadoop from the tip of this branch <footnote>
<para>Scroll down in the Hadoop <link xlink:href="http://wiki.apache.org/hadoop/HowToRelease">How To Release</link> to the section
Build Requirements for instruction on how to build Hadoop.
</para>
</footnote> or you could use
Cloudera's <link xlink:href="http://archive.cloudera.com/docs/">CDH3</link>.
CDH has the 0.20-append patches needed to add a durable sync (As of this writing
CDH3 is still in beta. Either CDH3b2 or CDH3b3 will suffice).
See <link xlink:href="http://svn.apache.org/viewvc/hadoop/common/branches/branch-0.20-append/CHANGES.txt">CHANGES.txt</link>
in branch-0.20-append to see list of patches involved.</para>
<para>Because HBase depends on Hadoop, it bundles an Hadoop instance under its <filename>lib</filename> directory.
The bundled Hadoop was made from the Apache branch-0.20-append branch.
If you want to run HBase on an Hadoop cluster that is other than a version made from branch-0.20.append,
you must replace the hadoop jar found in the HBase <filename>lib</filename> directory with the
hadoop jar you are running out on your cluster to avoid version mismatch issues.
For example, versions of CDH do not have HDFS-724 whereas
Hadoops branch-0.20-append branch does have HDFS-724. This
patch changes the RPC version because protocol was changed.
Version mismatch issues have various manifestations but often all looks like its hung up.
</para>
<note><title>Hadoop Security</title>
<para>HBase will run on any Hadoop 0.20.x that incorporates Hadoop security features -- e.g. Y! 0.20S or CDH3B3 -- as long
as you do as suggested above and replace the Hadoop jar that ships with HBase with the secure version.
</para>
</note>
</section>
<section xml:id="ssh"> <title>ssh</title>
<para><command>ssh</command> must be installed and <command>sshd</command> must
be running to use Hadoop's scripts to manage remote Hadoop and HBase daemons.
You must be able to ssh to all nodes, including your local node, using passwordless login (Google "ssh passwordless login").
</para>
</section>
<section xml:id="dns"><title>DNS</title>
<para>HBase uses the local hostname to self-report it's IP address. Both forward and reverse DNS resolving should work.</para>
<para>If your machine has multiple interfaces, HBase will use the interface that the primary hostname resolves to.</para>
<para>If this is insufficient, you can set <varname>hbase.regionserver.dns.interface</varname> to indicate the primary interface.
This only works if your cluster
configuration is consistent and every host has the same network interface configuration.</para>
<para>Another alternative is setting <varname>hbase.regionserver.dns.nameserver</varname> to choose a different nameserver than the
system wide default.</para>
</section>
<section xml:id="ntp"><title>NTP</title>
<para>
The clocks on cluster members should be in basic alignments. Some skew is tolerable but
wild skew could generate odd behaviors. Run <link xlink:href="http://en.wikipedia.org/wiki/Network_Time_Protocol">NTP</link>
on your cluster, or an equivalent.
</para>
<para>If you are having problems querying data, or "weird" cluster operations, check system time!</para>
</section>
<section xml:id="ulimit">
<title><varname>ulimit</varname></title>
<para>HBase is a database, it uses a lot of files at the same time.
The default ulimit -n of 1024 on *nix systems is insufficient.
Any significant amount of loading will lead you to
<link xlink:href="http://wiki.apache.org/hadoop/Hbase/FAQ#A6">FAQ: Why do I see "java.io.IOException...(Too many open files)" in my logs?</link>.
You may also notice errors such as
<programlisting>
2010-04-06 03:04:37,542 INFO org.apache.hadoop.hdfs.DFSClient: Exception increateBlockOutputStream java.io.EOFException
2010-04-06 03:04:37,542 INFO org.apache.hadoop.hdfs.DFSClient: Abandoning block blk_-6935524980745310745_1391901
</programlisting>
Do yourself a favor and change the upper bound on the number of file descriptors.
Set it to north of 10k. See the above referenced FAQ for how.</para>
<para>To be clear, upping the file descriptors for the user who is
running the HBase process is an operating system configuration, not an
HBase configuration. Also, a common mistake is that administrators
will up the file descriptors for a particular user but for whatever reason,
HBase will be running as some one else. HBase prints in its logs
as the first line the ulimit its seeing. Ensure its correct.
<footnote>
<para>A useful read setting config on you hadoop cluster is Aaron Kimballs'
<link xlink:ref="http://www.cloudera.com/blog/2009/03/configuration-parameters-what-can-you-just-ignore/">Configuration Parameters: What can you just ignore?</link>
</para>
</footnote>
</para>
<section xml:id="ulimit_ubuntu">
<title><varname>ulimit</varname> on Ubuntu</title>
<para>
If you are on Ubuntu you will need to make the following changes:</para>
<para>
In the file <filename>/etc/security/limits.conf</filename> add a line like:
<programlisting>hadoop - nofile 32768</programlisting>
Replace <varname>hadoop</varname>
with whatever user is running Hadoop and HBase. If you have
separate users, you will need 2 entries, one for each user.
</para>
<para>
In the file <filename>/etc/pam.d/common-session</filename> add as the last line in the file:
<programlisting>session required pam_limits.so</programlisting>
Otherwise the changes in <filename>/etc/security/limits.conf</filename> won't be applied.
</para>
<para>
Don't forget to log out and back in again for the changes to take effect!
</para>
</section>
</section>
<section xml:id="dfs.datanode.max.xcievers">
<title><varname>dfs.datanode.max.xcievers</varname></title>
<para>
An Hadoop HDFS datanode has an upper bound on the number of files
that it will serve at any one time.
The upper bound parameter is called
<varname>xcievers</varname> (yes, this is misspelled). Again, before
doing any loading, make sure you have configured
Hadoop's <filename>conf/hdfs-site.xml</filename>
setting the <varname>xceivers</varname> value to at least the following:
<programlisting>
&lt;property&gt;
&lt;name&gt;dfs.datanode.max.xcievers&lt;/name&gt;
&lt;value&gt;4096&lt;/value&gt;
&lt;/property&gt;
</programlisting>
</para>
<para>Be sure to restart your HDFS after making the above
configuration.</para>
</section>
<section xml:id="windows">
<title>Windows</title>
<para>
HBase has been little tested running on windows.
Running a production install of HBase on top of
windows is not recommended.
</para>
<para>
If you are running HBase on Windows, you must install
<link xlink:href="http://cygwin.com/">Cygwin</link>
to have a *nix-like environment for the shell scripts. The full details
are explained in the <link xlink:href="cygwin.html">Windows Installation</link>
guide.
</para>
</section>
</section>
<section><title>HBase run modes: Standalone and Distributed</title>
<para>HBase has two run modes: <link linkend="standalone">standalone</link>
and <link linkend="distributed">distributed</link>.
Out of the box, HBase runs in standalone mode. To set up a
distributed deploy, you will need to configure HBase by editing
files in the HBase <filename>conf</filename> directory.</para>
<para>Whatever your mode, you will need to edit <code>conf/hbase-env.sh</code>
to tell HBase which <command>java</command> to use. In this file
you set HBase environment variables such as the heapsize and other options
for the <application>JVM</application>, the preferred location for log files, etc.
Set <varname>JAVA_HOME</varname> to point at the root of your
<command>java</command> install.</para>
<section xml:id="standalone"><title>Standalone HBase</title>
<para>This is the default mode. Standalone mode is
what is described in the <link linkend="quickstart">quickstart</link>
section. In standalone mode, HBase does not use HDFS -- it uses the local
filesystem instead -- and it runs all HBase daemons and a local zookeeper
all up in the same JVM. Zookeeper binds to a well known port so clients may
talk to HBase.
</para>
</section>
<section><title>Distributed</title>
<para>Distributed mode can be subdivided into distributed but all daemons run on a
single node -- a.k.a <emphasis>pseudo-distributed</emphasis>-- and
<emphasis>fully-distributed</emphasis> where the daemons
are spread across all nodes in the cluster
<footnote><para>The pseudo-distributed vs fully-distributed nomenclature comes from Hadoop.</para></footnote>.</para>
<para>
Distributed modes require an instance of the
<emphasis>Hadoop Distributed File System</emphasis> (HDFS). See the
Hadoop <link xlink:href="http://hadoop.apache.org/common/docs/current/api/overview-summary.html#overview_description">
requirements and instructions</link> for how to set up a HDFS.
Before proceeding, ensure you have an appropriate, working HDFS.
</para>
<para>Below we describe the different distributed setups.
Starting, verification and exploration of your install, whether a
<emphasis>pseudo-distributed</emphasis> or <emphasis>fully-distributed</emphasis>
configuration is described in a section that follows,
<link linkend="confirm">Running and Confirming your Installation</link>.
The same verification script applies to both deploy types.</para>
<section xml:id="pseudo"><title>Pseudo-distributed</title>
<para>A pseudo-distributed mode is simply a distributed mode run on a single host.
Use this configuration testing and prototyping on HBase. Do not use this configuration
for production nor for evaluating HBase performance.
</para>
<para>Once you have confirmed your HDFS setup,
edit <filename>conf/hbase-site.xml</filename>. This is the file
into which you add local customizations and overrides for
<link linkend="hbase_default_configurations">Default HBase Configurations</link>
and <link linkend="hdfs_client_conf">HDFS Client Configurations</link>.
Point HBase at the running Hadoop HDFS instance by setting the
<varname>hbase.rootdir</varname> property.
This property points HBase at the Hadoop filesystem instance to use.
For example, adding the properties below to your
<filename>hbase-site.xml</filename> says that HBase
should use the <filename>/hbase</filename>
directory in the HDFS whose namenode is at port 9000 on your local machine, and that
it should run with one replica only (recommended for pseudo-distributed mode):</para>
<programlisting>
&lt;configuration&gt;
...
&lt;property&gt;
&lt;name&gt;hbase.rootdir&lt;/name&gt;
&lt;value&gt;hdfs://localhost:9000/hbase&lt;/value&gt;
&lt;description&gt;The directory shared by region servers.
&lt;/description&gt;
&lt;/property&gt;
&lt;property&gt;
&lt;name&gt;dfs.replication&lt;/name&gt;
&lt;value&gt;1&lt;/value&gt;
&lt;description&gt;The replication count for HLog &amp; HFile storage. Should not be greater than HDFS datanode count.
&lt;/description&gt;
&lt;/property&gt;
...
&lt;/configuration&gt;
</programlisting>
<note>
<para>Let HBase create the <varname>hbase.rootdir</varname>
directory. If you don't, you'll get warning saying HBase
needs a migration run because the directory is missing files
expected by HBase (it'll create them if you let it).</para>
</note>
<note>
<para>Above we bind to <varname>localhost</varname>.
This means that a remote client cannot
connect. Amend accordingly, if you want to
connect from a remote location.</para>
</note>
<para>Now skip to <link linkend="confirm">Running and Confirming your Installation</link>
for how to start and verify your pseudo-distributed install.
<footnote>
<para>See <link xlink:href="pseudo-distributed.html">Pseudo-distributed mode extras</link>
for notes on how to start extra Masters and regionservers when running
pseudo-distributed.</para>
</footnote>
</para>
</section>
<section xml:id="fully_dist"><title>Fully-distributed</title>
<para>For running a fully-distributed operation on more than one host, make
the following configurations. In <filename>hbase-site.xml</filename>,
add the property <varname>hbase.cluster.distributed</varname>
and set it to <varname>true</varname> and point the HBase
<varname>hbase.rootdir</varname> at the appropriate
HDFS NameNode and location in HDFS where you would like
HBase to write data. For example, if you namenode were running
at namenode.example.org on port 9000 and you wanted to home
your HBase in HDFS at <filename>/hbase</filename>,
make the following configuration.</para>
<programlisting>
&lt;configuration&gt;
...
&lt;property&gt;
&lt;name&gt;hbase.rootdir&lt;/name&gt;
&lt;value&gt;hdfs://namenode.example.org:9000/hbase&lt;/value&gt;
&lt;description&gt;The directory shared by region servers.
&lt;/description&gt;
&lt;/property&gt;
&lt;property&gt;
&lt;name&gt;hbase.cluster.distributed&lt;/name&gt;
&lt;value&gt;true&lt;/value&gt;
&lt;description&gt;The mode the cluster will be in. Possible values are
false: standalone and pseudo-distributed setups with managed Zookeeper
true: fully-distributed with unmanaged Zookeeper Quorum (see hbase-env.sh)
&lt;/description&gt;
&lt;/property&gt;
...
&lt;/configuration&gt;
</programlisting>
<section><title><filename>regionservers</filename></title>
<para>In addition, a fully-distributed mode requires that you
modify <filename>conf/regionservers</filename>.
The <filename><link linkend="regionservrers">regionservers</link></filename> file lists all hosts
that you would have running <application>HRegionServer</application>s, one host per line
(This file in HBase is like the Hadoop <filename>slaves</filename> file). All servers
listed in this file will be started and stopped when HBase cluster start or stop is run.</para>
</section>
<section xml:id="zookeeper"><title>ZooKeeper<indexterm><primary>ZooKeeper</primary></indexterm></title>
<para>A distributed HBase depends on a running ZooKeeper cluster.
All participating nodes and clients
need to be able to access the running ZooKeeper ensemble.
HBase by default manages a ZooKeeper "cluster" for you.
It will start and stop the ZooKeeper ensemble as part of
the HBase start/stop process. You can also manage
the ZooKeeper ensemble independent of HBase and
just point HBase at the cluster it should use.
To toggle HBase management of ZooKeeper,
use the <varname>HBASE_MANAGES_ZK</varname> variable in
<filename>conf/hbase-env.sh</filename>.
This variable, which defaults to <varname>true</varname>, tells HBase whether to
start/stop the ZooKeeper ensemble servers as part of HBase start/stop.</para>
<para>When HBase manages the ZooKeeper ensemble, you can specify ZooKeeper configuration
using its native <filename>zoo.cfg</filename> file, or, the easier option
is to just specify ZooKeeper options directly in <filename>conf/hbase-site.xml</filename>.
A ZooKeeper configuration option can be set as a property in the HBase
<filename>hbase-site.xml</filename>
XML configuration file by prefacing the ZooKeeper option name with
<varname>hbase.zookeeper.property</varname>.
For example, the <varname>clientPort</varname> setting in ZooKeeper can be changed by
setting the <varname>hbase.zookeeper.property.clientPort</varname> property.
For all default values used by HBase, including ZooKeeper configuration,
see the section
<link linkend="hbase_default_configurations">Default HBase Configurations</link>.
Look for the <varname>hbase.zookeeper.property</varname> prefix
<footnote><para>For the full list of ZooKeeper configurations,
see ZooKeeper's <filename>zoo.cfg</filename>.
HBase does not ship with a <filename>zoo.cfg</filename> so you will need to
browse the <filename>conf</filename> directory in an appropriate ZooKeeper download.
</para>
</footnote>
</para>
<para>You must at least list the ensemble servers in <filename>hbase-site.xml</filename>
using the <varname>hbase.zookeeper.quorum</varname> property.
This property defaults to a single ensemble member at
<varname>localhost</varname> which is not suitable for a
fully distributed HBase. (It binds to the local machine only and remote clients
will not be able to connect).
<note xml:id="how_many_zks">
<title>How many ZooKeepers should I run?</title>
<para>
You can run a ZooKeeper ensemble that comprises 1 node only but
in production it is recommended that you run a ZooKeeper ensemble of
3, 5 or 7 machines; the more members an ensemble has, the more
tolerant the ensemble is of host failures. Also, run an odd number of machines.
There can be no quorum if the number of members is an even number. Give each
ZooKeeper server around 1GB of RAM, and if possible, its own dedicated disk
(A dedicated disk is the best thing you can do to ensure a performant ZooKeeper
ensemble). For very heavily loaded clusters, run ZooKeeper servers on separate machines from
RegionServers (DataNodes and TaskTrackers).</para>
</note>
</para>
<para>For example, to have HBase manage a ZooKeeper quorum on nodes
<emphasis>rs{1,2,3,4,5}.example.com</emphasis>, bound to port 2222 (the default is 2181)
ensure <varname>HBASE_MANAGE_ZK</varname> is commented out or set to
<varname>true</varname> in <filename>conf/hbase-env.sh</filename> and
then edit <filename>conf/hbase-site.xml</filename> and set
<varname>hbase.zookeeper.property.clientPort</varname>
and
<varname>hbase.zookeeper.quorum</varname>. You should also
set
<varname>hbase.zookeeper.property.dataDir</varname>
to other than the default as the default has ZooKeeper persist data under
<filename>/tmp</filename> which is often cleared on system restart.
In the example below we have ZooKeeper persist to <filename>/user/local/zookeeper</filename>.
<programlisting>
&lt;configuration&gt;
...
&lt;property&gt;
&lt;name&gt;hbase.zookeeper.property.clientPort&lt;/name&gt;
&lt;value&gt;2222&lt;/value&gt;
&lt;description&gt;Property from ZooKeeper's config zoo.cfg.
The port at which the clients will connect.
&lt;/description&gt;
&lt;/property&gt;
&lt;property&gt;
&lt;name&gt;hbase.zookeeper.quorum&lt;/name&gt;
&lt;value&gt;rs1.example.com,rs2.example.com,rs3.example.com,rs4.example.com,rs5.example.com&lt;/value&gt;
&lt;description&gt;Comma separated list of servers in the ZooKeeper Quorum.
For example, "host1.mydomain.com,host2.mydomain.com,host3.mydomain.com".
By default this is set to localhost for local and pseudo-distributed modes
of operation. For a fully-distributed setup, this should be set to a full
list of ZooKeeper quorum servers. If HBASE_MANAGES_ZK is set in hbase-env.sh
this is the list of servers which we will start/stop ZooKeeper on.
&lt;/description&gt;
&lt;/property&gt;
&lt;property&gt;
&lt;name&gt;hbase.zookeeper.property.dataDir&lt;/name&gt;
&lt;value&gt;/usr/local/zookeeper&lt;/value&gt;
&lt;description>Property from ZooKeeper's config zoo.cfg.
The directory where the snapshot is stored.
&lt;/description&gt;
&lt;/property&gt;
...
&lt;/configuration&gt;</programlisting>
</para>
<section><title>Using existing ZooKeeper ensemble</title>
<para>To point HBase at an existing ZooKeeper cluster,
one that is not managed by HBase,
set <varname>HBASE_MANAGES_ZK</varname> in
<filename>conf/hbase-env.sh</filename> to false
<programlisting>
...
# Tell HBase whether it should manage it's own instance of Zookeeper or not.
export HBASE_MANAGES_ZK=false</programlisting>
Next set ensemble locations and client port, if non-standard,
in <filename>hbase-site.xml</filename>,
or add a suitably configured <filename>zoo.cfg</filename> to HBase's <filename>CLASSPATH</filename>.
HBase will prefer the configuration found in <filename>zoo.cfg</filename>
over any settings in <filename>hbase-site.xml</filename>.
</para>
<para>When HBase manages ZooKeeper, it will start/stop the ZooKeeper servers as a part
of the regular start/stop scripts. If you would like to run ZooKeeper yourself,
independent of HBase start/stop, you would do the following</para>
<programlisting>
${HBASE_HOME}/bin/hbase-daemons.sh {start,stop} zookeeper
</programlisting>
<para>Note that you can use HBase in this manner to spin up a ZooKeeper cluster,
unrelated to HBase. Just make sure to set <varname>HBASE_MANAGES_ZK</varname> to
<varname>false</varname> if you want it to stay up across HBase restarts
so that when HBase shuts down, it doesn't take ZooKeeper down with it.</para>
<para>For more information about running a distinct ZooKeeper cluster, see
the ZooKeeper <link xlink:href="http://hadoop.apache.org/zookeeper/docs/current/zookeeperStarted.html">Getting Started Guide</link>.
</para>
</section>
</section>
<section xml:id="hdfs_client_conf">
<title>HDFS Client Configuration</title>
<para>Of note, if you have made <emphasis>HDFS client configuration</emphasis> on your Hadoop cluster
-- i.e. configuration you want HDFS clients to use as opposed to server-side configurations --
HBase will not see this configuration unless you do one of the following:</para>
<itemizedlist>
<listitem><para>Add a pointer to your <varname>HADOOP_CONF_DIR</varname>
to the <varname>HBASE_CLASSPATH</varname> environment variable
in <filename>hbase-env.sh</filename>.</para></listitem>
<listitem><para>Add a copy of <filename>hdfs-site.xml</filename>
(or <filename>hadoop-site.xml</filename>) or, better, symlinks,
under
<filename>${HBASE_HOME}/conf</filename>, or</para></listitem>
<listitem><para>if only a small set of HDFS client
configurations, add them to <filename>hbase-site.xml</filename>.</para></listitem>
</itemizedlist>
<para>An example of such an HDFS client configuration is <varname>dfs.replication</varname>. If for example,
you want to run with a replication factor of 5, hbase will create files with the default of 3 unless
you do the above to make the configuration available to HBase.</para>
</section>
</section>
</section>
<section xml:id="confirm"><title>Running and Confirming Your Installation</title>
<para>Make sure HDFS is running first.
Start and stop the Hadoop HDFS daemons by running <filename>bin/start-hdfs.sh</filename>
over in the <varname>HADOOP_HOME</varname> directory.
You can ensure it started properly by testing the <command>put</command> and
<command>get</command> of files into the Hadoop filesystem.
HBase does not normally use the mapreduce daemons. These do not need to be started.</para>
<para><emphasis>If</emphasis> you are managing your own ZooKeeper, start it
and confirm its running else, HBase will start up ZooKeeper for you as part
of its start process.</para>
<para>Start HBase with the following command:</para>
<programlisting>bin/start-hbase.sh</programlisting>
Run the above from the <varname>HBASE_HOME</varname> directory.
<para>You should now have a running HBase instance.
HBase logs can be found in the <filename>logs</filename> subdirectory. Check them
out especially if HBase had trouble starting.</para>
<para>HBase also puts up a UI listing vital attributes. By default its deployed on the Master host
at port 60010 (HBase RegionServers listen on port 60020 by default and put up an informational
http server at 60030). If the Master were running on a host named <varname>master.example.org</varname>
on the default port, to see the Master's homepage you'd point your browser at
<filename>http://master.example.org:60010</filename>.</para>
<para>Once HBase has started, see the
<link linkend="shell_exercises">Shell Exercises</link> section for how to
create tables, add data, scan your insertions, and finally disable and
drop your tables.
</para>
<para>To stop HBase after exiting the HBase shell enter
<programlisting>$ ./bin/stop-hbase.sh
stopping hbase...............</programlisting>
Shutdown can take a moment to complete. It can take longer if your cluster
is comprised of many machines. If you are running a distributed operation,
be sure to wait until HBase has shut down completely
before stopping the Hadoop daemons.</para>
</section>
</section>
<section><title>Example Configurations</title>
<section><title>Basic Distributed HBase Install</title>
<para>Here is an example basic configuration for a distributed ten node cluster.
The nodes are named <varname>example0</varname>, <varname>example1</varname>, etc., through
node <varname>example9</varname> in this example. The HBase Master and the HDFS namenode
are running on the node <varname>example0</varname>. RegionServers run on nodes
<varname>example1</varname>-<varname>example9</varname>.
A 3-node ZooKeeper ensemble runs on <varname>example1</varname>,
<varname>example2</varname>, and <varname>example3</varname> on the
default ports. ZooKeeper data is persisted to the directory
<filename>/export/zookeeper</filename>.
Below we show what the main configuration files
-- <filename>hbase-site.xml</filename>, <filename>regionservers</filename>, and
<filename>hbase-env.sh</filename> -- found in the HBase
<filename>conf</filename> directory might look like.
</para>
<section xml:id="hbase_site"><title><filename>hbase-site.xml</filename></title>
<programlisting>
<![CDATA[
<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
<configuration>
<property>
<name>hbase.zookeeper.quorum</name>
<value>example1,example2,example3</value>
<description>The directory shared by region servers.
</description>
</property>
<property>
<name>hbase.zookeeper.property.dataDir</name>
<value>/export/zookeeper</value>
<description>Property from ZooKeeper's config zoo.cfg.
The directory where the snapshot is stored.
</description>
</property>
<property>
<name>hbase.rootdir</name>
<value>hdfs://example1:9000/hbase</value>
<description>The directory shared by region servers.
</description>
</property>
<property>
<name>hbase.cluster.distributed</name>
<value>true</value>
<description>The mode the cluster will be in. Possible values are
false: standalone and pseudo-distributed setups with managed Zookeeper
true: fully-distributed with unmanaged Zookeeper Quorum (see hbase-env.sh)
</description>
</property>
</configuration>
]]>
</programlisting>
</section>
<section xml:id="regionservers"><title><filename>regionservers</filename></title>
<para>In this file you list the nodes that will run regionservers. In
our case we run regionservers on all but the head node
<varname>example1</varname> which is
carrying the HBase Master and the HDFS namenode</para>
<programlisting>
example1
example3
example4
example5
example6
example7
example8
example9
</programlisting>
</section>
<section xml:id="hbase_env"><title><filename>hbase-env.sh</filename></title>
<para>Below we use a <command>diff</command> to show the differences from
default in the <filename>hbase-env.sh</filename> file. Here we are setting
the HBase heap to be 4G instead of the default 1G.
</para>
<programlisting>
<![CDATA[
$ git diff hbase-env.sh
diff --git a/conf/hbase-env.sh b/conf/hbase-env.sh
index e70ebc6..96f8c27 100644
--- a/conf/hbase-env.sh
+++ b/conf/hbase-env.sh
@@ -31,7 +31,7 @@ export JAVA_HOME=/usr/lib//jvm/java-6-sun/
# export HBASE_CLASSPATH=
# The maximum amount of heap to use, in MB. Default is 1000.
-# export HBASE_HEAPSIZE=1000
+export HBASE_HEAPSIZE=4096
# Extra Java runtime options.
# Below are what we set by default. May only work with SUN JVM.
]]>
</programlisting>
<para>Use <command>rsync</command> to copy the content of
the <filename>conf</filename> directory to
all nodes of the cluster.
</para>
</section>
</section>
</section>
</section>
</chapter>
<chapter xml:id="configuration">
<title>Configuration</title>
<para>
HBase uses the same configuration system as Hadoop.
To configure a deploy, edit a file of environment variables
in <filename>conf/hbase-env.sh</filename> -- this configuration
is used mostly by the launcher shell scripts getting the cluster
off the ground -- and then add configuration to an XML file to
do things like override HBase defaults, tell HBase what Filesystem to
use, and the location of the ZooKeeper ensemble
<footnote>
<para>
Be careful editing XML. Make sure you close all elements.
Run your file through <command>xmmlint</command> or similar
to ensure well-formedness of your document after an edit session.
</para>
</footnote>
.
</para>
<para>When running in distributed mode, after you make
an edit to an HBase configuration, make sure you copy the
content of the <filename>conf</filename> directory to
all nodes of the cluster. HBase will not do this for you.
Use <command>rsync</command>.</para>
<section>
<title><filename>hbase-site.xml</filename> and <filename>hbase-default.xml</filename></title>
<para>Just as in Hadoop where you add site-specific HDFS configuration
to the <filename>hdfs-site.xml</filename> file,
for HBase, site specific customizations go into
the file <filename>conf/hbase-site.xml</filename>.
For the list of configurable properties, see
<link linkend="hbase_default_configurations">Default HBase Configurations</link>
below or view the raw <filename>hbase-default.xml</filename>
source file in the HBase source code at
<filename>src/main/resources</filename>.
</para>
<para>
Not all configuration options make it out to
<filename>hbase-default.xml</filename>. Configuration
that it is thought rare anyone would change can exist only
in code; the only way to turn up such configurations is
via a reading of the source code itself.
</para>
<para>
Changes here will require a cluster restart for HBase to notice the change.
</para>
<!--The file hbase-default.xml is generated as part of
the build of the hbase site. See the hbase pom.xml.
The generated file is a docbook section with a glossary
in it-->
<xi:include xmlns:xi="http://www.w3.org/2001/XInclude"
href="../../target/site/hbase-default.xml" />
</section>
<section>
<title><filename>hbase-env.sh</filename></title>
<para>Set HBase environment variables in this file.
Examples include options to pass the JVM on start of
an HBase daemon such as heap size and garbarge collector configs.
You also set configurations for HBase configuration, log directories,
niceness, ssh options, where to locate process pid files,
etc., via settings in this file. Open the file at
<filename>conf/hbase-env.sh</filename> and peruse its content.
Each option is fairly well documented. Add your own environment
variables here if you want them read by HBase daemon startup.</para>
<para>
Changes here will require a cluster restart for HBase to notice the change.
</para>
</section>
<section xml:id="log4j">
<title><filename>log4j.properties</filename></title>
<para>Edit this file to change rate at which HBase files
are rolled and to change the level at which HBase logs messages.
</para>
<para>
Changes here will require a cluster restart for HBase to notice the change
though log levels can be changed for particular daemons via the HBase UI.
</para>
</section>
<section xml:id="important_configurations">
<title>The Important Configurations</title>
<para>Below we list the important Configurations. We've divided this section into
required configuration and worth-a-look recommended configs.
</para>
<section xml:id="required_configuration"><title>Required Configurations</title>
<para>See the <link linkend="requirements">Requirements</link> section.
It lists at least two required configurations needed running HBase bearing
load: i.e. <link linkend="ulimit">file descriptors <varname>ulimit</varname></link> and
<link linkend="dfs.datanode.max.xcievers"><varname>dfs.datanode.max.xcievers</varname></link>.
</para>
</section>
<section xml:id="recommended_configurations"><title>Recommended Configuations</title>
<section xml:id="zookeeper.session.timeout"><title><varname>zookeeper.session.timeout</varname></title>
<para>The default timeout is three minutes (specified in milliseconds). This means
that if a server crashes, it will be three minutes before the Master notices
the crash and starts recovery. You might like to tune the timeout down to
a minute or even less so the Master notices failures the sooner.
Before changing this value, be sure you have your JVM garbage collection
configuration under control otherwise, a long garbage collection that lasts
beyond the zookeeper session timeout will take out
your RegionServer (You might be fine with this -- you probably want recovery to start
on the server if a RegionServer has been in GC for a long period of time).</para>
<para>To change this configuration, edit <filename>hbase-site.xml</filename>,
copy the changed file around the cluster and restart.</para>
<para>We set this value high to save our having to field noob questions up on the mailing lists asking
why a RegionServer went down during a massive import. The usual cause is that their JVM is untuned and
they are running into long GC pauses. Our thinking is that
while users are getting familiar with HBase, we'd save them having to know all of its
intricacies. Later when they've built some confidence, then they can play
with configuration such as this.
</para>
</section>
<section xml:id="hbase.regionserver.handler.count"><title><varname>hbase.regionserver.handler.count</varname></title>
<para>
This setting defines the number of threads that are kept open to answer
incoming requests to user tables. The default of 10 is rather low in order to
prevent users from killing their region servers when using large write buffers
with a high number of concurrent clients. The rule of thumb is to keep this
number low when the payload per request approaches the MB (big puts, scans using
a large cache) and high when the payload is small (gets, small puts, ICVs, deletes).
</para>
<para>
It is safe to set that number to the
maximum number of incoming clients if their payload is small, the typical example
being a cluster that serves a website since puts aren't typically buffered
and most of the operations are gets.
</para>
<para>
The reason why it is dangerous to keep this setting high is that the aggregate
size of all the puts that are currently happening in a region server may impose
too much pressure on its memory, or even trigger an OutOfMemoryError. A region server
running on low memory will trigger its JVM's garbage collector to run more frequently
up to a point where GC pauses become noticeable (the reason being that all the memory
used to keep all the requests' payloads cannot be trashed, no matter how hard the
garbage collector tries). After some time, the overall cluster
throughput is affected since every request that hits that region server will take longer,
which exacerbates the problem even more.
</para>
</section>
<section xml:id="big_memory">
<title>Configuration for large memory machines</title>
<para>
HBase ships with a reasonable, conservative configuration that will
work on nearly all
machine types that people might want to test with. If you have larger
machines you might the following configuration options helpful.
</para>
</section>
<section xml:id="lzo">
<title>LZO compression</title>
<para>You should consider enabling LZO compression. Its
near-frictionless and in most all cases boosts performance.
</para>
<para>Unfortunately, HBase cannot ship with LZO because of
the licensing issues; HBase is Apache-licensed, LZO is GPL.
Therefore LZO install is to be done post-HBase install.
See the <link xlink:href="http://wiki.apache.org/hadoop/UsingLzoCompression">Using LZO Compression</link>
wiki page for how to make LZO work with HBase.
</para>
<para>A common problem users run into when using LZO is that while initial
setup of the cluster runs smooth, a month goes by and some sysadmin goes to
add a machine to the cluster only they'll have forgotten to do the LZO
fixup on the new machine. In versions since HBase 0.90.0, we should
fail in a way that makes it plain what the problem is, but maybe not.
Remember you read this paragraph<footnote><para>See
<link linkend="hbase.regionserver.codecs">hbase.regionserver.codecs</link>
for a feature to help protect against failed LZO install</para></footnote>.
</para>
</section>
</section>
</section>
<section xml:id="client_dependencies"><title>Client configuration and dependencies connecting to an HBase cluster</title>
<para>
Since the HBase Master may move around, clients bootstrap by looking ZooKeeper. Thus clients
require the ZooKeeper quorum information in a <filename>hbase-site.xml</filename> that
is on their <varname>CLASSPATH</varname>.</para>
<para>If you are configuring an IDE to run a HBase client, you should
include the <filename>conf/</filename> directory on your classpath.
</para>
<para>
Minimally, a client of HBase needs the hbase, hadoop, guava, and zookeeper jars
in its <varname>CLASSPATH</varname> connecting to HBase.
</para>
<para>
An example basic <filename>hbase-site.xml</filename> for client only
might look as follows:
<programlisting><![CDATA[
<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
<configuration>
<property>
<name>hbase.zookeeper.quorum</name>
<value>example1,example2,example3</value>
<description>The directory shared by region servers.
</description>
</property>
</configuration>
]]>
</programlisting>
</para>
</section>
</chapter>
<chapter xml:id="shell">
<title>The HBase Shell</title>
<para>
The HBase Shell is <link xlink:href="http://jruby.org">(J)Ruby</link>'s
IRB with some HBase particular verbs added. Anything you can do in
IRB, you should be able to do in the HBase Shell.</para>
<para>To run the HBase shell,
do as follows:
<programlisting>$ ./bin/hbase shell</programlisting>
</para>
<para>Type <command>help</command> and then <command>&lt;RETURN&gt;</command>
to see a listing of shell
commands and options. Browse at least the paragraphs at the end of
the help emission for the gist of how variables and command
arguments are entered into the
HBase shell; in particular note how table names, rows, and
columns, etc., must be quoted.</para>
<para>See <link linkend="shell_exercises">Shell Exercises</link>
for example basic shell operation.</para>
<section><title>Scripting</title>
<para>For examples scripting HBase, look in the
HBase <filename>bin</filename> directory. Look at the files
that end in <filename>*.rb</filename>. To run one of these
files, do as follows:
<programlisting>$ ./bin/hbase org.jruby.Main PATH_TO_SCRIPT</programlisting>
</para>
</section>
<section xml:id="shell_tricks"><title>Shell Tricks</title>
<section><title><filename>irbrc</filename></title>
<para>Create an <filename>.irbrc</filename> file for yourself in your
home directory. Add customizations. A useful one is
command history so commands are save across Shell invocations:
<programlisting>
$ more .irbrc
require 'irb/ext/save-history'
IRB.conf[:SAVE_HISTORY] = 100
IRB.conf[:HISTORY_FILE] = "#{ENV['HOME']}/.irb-save-history"</programlisting>
See the <application>ruby</application> documentation of
<filename>.irbrc</filename> to learn about other possible
confiurations.
</para>
</section>
<section><title>LOG data to timestamp</title>
<para>
To convert the date '08/08/16 20:56:29' from an hbase log into a timestamp, do:
<programlisting>
hbase(main):021:0> import java.text.SimpleDateFormat
hbase(main):022:0> import java.text.ParsePosition
hbase(main):023:0> SimpleDateFormat.new("yy/MM/dd HH:mm:ss").parse("08/08/16 20:56:29", ParsePosition.new(0)).getTime() => 1218920189000</programlisting>
</para>
<para>
To go the other direction:
<programlisting>
hbase(main):021:0> import java.util.Date
hbase(main):022:0> Date.new(1218920189000).toString() => "Sat Aug 16 20:56:29 UTC 2008"</programlisting>
</para>
<para>
To output in a format that is exactly like that of the HBase log format will take a little messing with
<link xlink:href="http://download.oracle.com/javase/6/docs/api/java/text/SimpleDateFormat.html">SimpleDateFormat</link>.
</para>
</section>
<section><title>Debug</title>
<section><title>Shell debug switch</title>
<para>You can set a debug switch in the shell to see more output
-- e.g. more of the stack trace on exception --
when you run a command:
<programlisting>hbase> debug &lt;RETURN&gt;</programlisting>
</para>
</section>
<section><title>DEBUG log level</title>
<para>To enable DEBUG level logging in the shell,
launch it with the <command>-d</command> option.
<programlisting>$ ./bin/hbase shell -d</programlisting>
</para>
</section>
</section>
</section>
</chapter>
<chapter xml:id="mapreduce">
<title>HBase and MapReduce</title>
<para>See <link xlink:href="apidocs/org/apache/hadoop/hbase/mapreduce/package-summary.html#package_description">HBase and MapReduce</link>
up in javadocs.</para>
</chapter>
<chapter xml:id="hbase_metrics">
<title>Metrics</title>
<para>See <link xlink:href="metrics.html">Metrics</link>.
</para>
</chapter>
<chapter xml:id="cluster_replication">
<title>Cluster Replication</title>
<para>See <link xlink:href="replication.html">Cluster Replication</link>.
</para>
</chapter>
<chapter xml:id="datamodel">
<title>Data Model</title>
<para>In short, applications store data into HBase <link linkend="table">tables</link>.
Tables are made of <link linkend="row">rows</link> and <emphasis>columns</emphasis>.
All colums in HBase belong to a particular
<link linkend="columnfamily">Column Family</link>.
Table <link linkend="cell">cells</link> -- the intersection of row and column
coordinates -- are versioned.
A cell’s content is an uninterpreted array of bytes.
</para>
<para>Table row keys are also byte arrays so almost anything can
serve as a row key from strings to binary representations of longs or
even serialized data structures. Rows in HBase tables
are sorted by row key. The sort is byte-ordered. All table accesses are
via the table row key -- its primary key.
</para>
<section xml:id="table">
<title>Table</title>
<para>
Tables are declared up front at schema definition time.
</para>
</section>
<section xml:id="row">
<title>Row</title>
<para>Row keys are uninterrpreted bytes. Rows are
lexicographically sorted with the lowest order appearing first
in a table. The empty byte array is used to denote both the
start and end of a tables' namespace.</para>
</section>
<section xml:id="columnfamily">
<title>Column Family<indexterm><primary>Column Family</primary></indexterm></title>
<para>
Columns in HBase are grouped into <emphasis>column families</emphasis>.
All column members of a column family have a common prefix. For example, the
columns <emphasis>courses:history</emphasis> and
<emphasis>courses:math</emphasis> are both members of the
<emphasis>courses</emphasis> column family.
The colon character (<literal
moreinfo="none">:</literal>) delimits the column family from the
<indexterm>column family <emphasis>qualifier</emphasis><primary>Column Family Qualifier</primary></indexterm>.
The column family prefix must be composed of
<emphasis>printable</emphasis> characters. The qualifying tail, the
column family <emphasis>qualifier</emphasis>, can be made of any
arbitrary bytes. Column families must be declared up front
at schema definition time whereas columns do not need to be
defined at schema time but can be conjured on the fly while
the table is up an running.</para>
<para>Physically, all column family members are stored together on the
filesystem. Because tunings and
storage specifications are done at the column family level, it is
advised that all column family members have the same general access
pattern and size characteristics.</para>
<para></para>
</section>
<section>
<title>Cells<indexterm><primary>Cells</primary></indexterm></title>
<para>A <emphasis>{row, column, version} </emphasis>tuple exactly
specifies a <literal>cell</literal> in HBase.
Cell content is uninterrpreted bytes</para>
</section>
<section xml:id="versions">
<title>Versions<indexterm><primary>Versions</primary></indexterm></title>
<para>A <emphasis>{row, column, version} </emphasis>tuple exactly
specifies a <literal>cell</literal> in HBase. Its possible to have an
unbounded number of cells where the row and column are the same but the
cell address differs only in its version dimension.</para>
<para>While rows and column keys are expressed as bytes, the version is
specified using a long integer. Typically this long contains time
instances such as those returned by
<code>java.util.Date.getTime()</code> or
<code>System.currentTimeMillis()</code>, that is: <quote>the difference,
measured in milliseconds, between the current time and midnight, January
1, 1970 UTC</quote>.</para>
<para>The HBase version dimension is stored in decreasing order, so that
when reading from a store file, the most recent values are found
first.</para>
<para>There is a lot of confusion over the semantics of
<literal>cell</literal> versions, in HBase. In particular, a couple
questions that often come up are:<itemizedlist>
<listitem>
<para>If multiple writes to a cell have the same version, are all
versions maintained or just the last?<footnote>
<para>Currently, only the last written is fetchable.</para>
</footnote></para>
</listitem>
<listitem>
<para>Is it OK to write cells in a non-increasing version
order?<footnote>
<para>Yes</para>
</footnote></para>
</listitem>
</itemizedlist></para>
<para>Below we describe how the version dimension in HBase currently
works<footnote>
<para>See <link
xlink:href="https://issues.apache.org/jira/browse/HBASE-2406">HBASE-2406</link>
for discussion of HBase versions. <link
xlink:href="http://outerthought.org/blog/417-ot.html">Bending time
in HBase</link> makes for a good read on the version, or time,
dimension in HBase. It has more detail on versioning than is
provided here. As of this writing, the limiitation
<emphasis>Overwriting values at existing timestamps</emphasis>
mentioned in the article no longer holds in HBase. This section is
basically a synopsis of this article by Bruno Dumon.</para>
</footnote>.</para>
<section>
<title>Versions and HBase Operations</title>
<para>In this section we look at the behavior of the version dimension
for each of the core HBase operations.</para>
<section>
<title>Get/Scan</title>
<para>Gets are implemented on top of Scans. The below discussion of
Get applies equally to Scans.</para>
<para>By default, i.e. if you specify no explicit version, when
doing a <literal>get</literal>, the cell whose version has the
largest value is returned (which may or may not be the latest one
written, see later). The default behavior can be modified in the
following ways:</para>
<itemizedlist>
<listitem>
<para>to return more than one version, see <link
xlink:href="http://hbase.apache.org/docs/current/api/org/apache/hadoop/hbase/client/Get.html#setMaxVersions()">Get.setMaxVersions()</link></para>
</listitem>
<listitem>
<para>to return versions other than the latest, see <link
xlink:href="???">Get.setTimeRange()</link></para>
<para>To retrieve the latest version that is less than or equal
to a given value, thus giving the 'latest' state of the record
at a certain point in time, just use a range from 0 to the
desired version and set the max versions to 1.</para>
</listitem>
</itemizedlist>
</section>
<section>
<title>Put</title>
<para>Doing a put always creates a new version of a
<literal>cell</literal>, at a certain timestamp. By default the
system uses the server's <literal>currentTimeMillis</literal>, but
you can specify the version (= the long integer) yourself, on a
per-column level. This means you could assign a time in the past or
the future, or use the long value for non-time purposes.</para>
<para>To overwrite an existing value, do a put at exactly the same
row, column, and version as that of the cell you would
overshadow.</para>
</section>
<section>
<title>Delete</title>
<para>When performing a delete operation in HBase, there are two
ways to specify the versions to be deleted</para>
<itemizedlist>
<listitem>
<para>Delete all versions older than a certain timestamp</para>
</listitem>
<listitem>
<para>Delete the version at a specific timestamp</para>
</listitem>
</itemizedlist>
<para>A delete can apply to a complete row, a complete column
family, or to just one column. It is only in the last case that you
can delete explicit versions. For the deletion of a row or all the
columns within a family, it always works by deleting all cells older
than a certain version.</para>
<para>Deletes work by creating <emphasis>tombstone</emphasis>
markers. For example, let's suppose we want to delete a row. For
this you can specify a version, or else by default the
<literal>currentTimeMillis</literal> is used. What this means is
<quote>delete all cells where the version is less than or equal to
this version</quote>. HBase never modifies data in place, so for
example a delete will not immediately delete (or mark as deleted)
the entries in the storage file that correspond to the delete
condition. Rather, a so-called <emphasis>tombstone</emphasis> is
written, which will mask the deleted values<footnote>
<para>When HBase does a major compaction, the tombstones are
processed to actually remove the dead values, together with the
tombstones themselves.</para>
</footnote>. If the version you specified when deleting a row is
larger than the version of any value in the row, then you can
consider the complete row to be deleted.</para>
</section>
</section>
<section>
<title>Current Limitations</title>
<para>There are still some bugs (or at least 'undecided behavior')
with the version dimension that will be addressed by later HBase
releases.</para>
<section>
<title>Deletes mask Puts</title>
<para>Deletes mask puts, even puts that happened after the delete
was entered<footnote>
<para><link
xlink:href="https://issues.apache.org/jira/browse/HBASE-2256">HBASE-2256</link></para>
</footnote>. Remember that a delete writes a tombstone, which only
disappears after then next major compaction has run. Suppose you do
a delete of everything &lt;= T. After this you do a new put with a
timestamp &lt;= T. This put, even if it happened after the delete,
will be masked by the delete tombstone. Performing the put will not
fail, but when you do a get you will notice the put did have no
effect. It will start working again after the major compaction has
run. These issues should not be a problem if you use
always-increasing versions for new puts to a row. But they can occur
even if you do not care about time: just do delete and put
immediately after each other, and there is some chance they happen
within the same millisecond.</para>
</section>
<section>
<title>Major compactions change query results</title>
<para><quote>...create three cell versions at t1, t2 and t3, with a
maximum-versions setting of 2. So when getting all versions, only
the values at t2 and t3 will be returned. But if you delete the
version at t2 or t3, the one at t1 will appear again. Obviously,
once a major compaction has run, such behavior will not be the case
anymore...<footnote>
<para>See <emphasis>Garbage Collection</emphasis> in <link
xlink:href="http://outerthought.org/blog/417-ot.html">Bending
time in HBase</link> </para>
</footnote></quote></para>
</section>
</section>
</section>
</chapter>
<chapter xml:id="architecture">
<title>Architecture</title>
<section>
<title>Daemons</title>
<section><title>Master</title>
</section>
<section><title>RegionServer</title>
</section>
</section>
<section>
<title>Regions</title>
<para>This chapter is all about Regions.</para>
<note>
<para>Regions are comprised of a Store per Column Family.
</para>
</note>
<section>
<title>Region Size</title>
<para>Region size is one of those tricky things, there are a few factors
to consider:</para>
<itemizedlist>
<listitem>
<para>Regions are the basic element of availability and
distribution.</para>
</listitem>
<listitem>
<para>HBase scales by having regions across many servers. Thus if
you have 2 regions for 16GB data, on a 20 node machine you are a net
loss there.</para>
</listitem>
<listitem>
<para>High region count has been known to make things slow, this is
getting better, but it is probably better to have 700 regions than
3000 for the same amount of data.</para>
</listitem>
<listitem>
<para>Low region count prevents parallel scalability as per point
#2. This really cant be stressed enough, since a common problem is
loading 200MB data into HBase then wondering why your awesome 10
node cluster is mostly idle.</para>
</listitem>
<listitem>
<para>There is not much memory footprint difference between 1 region
and 10 in terms of indexes, etc, held by the regionserver.</para>
</listitem>
</itemizedlist>
<para>Its probably best to stick to the default, perhaps going smaller
for hot tables (or manually split hot regions to spread the load over
the cluster), or go with a 1GB region size if your cell sizes tend to be
largish (100k and up).</para>
</section>
<section>
<title>Region Splits</title>
<para>Splits run unaided on the RegionServer; i.e. the Master does not
participate. The RegionServer splits a region, offlines the split
region and then adds the daughter regions to META, opens daughters on
the parent's hosting RegionServer and then reports the split to the
Master.</para>
</section>
<section>
<title>Region Load Balancer</title>
<para>
Periodically, and when there are not any regions in transition, a load balancer will run and move regions around to balance cluster load.
</para>
</section>
<section xml:id="store">
<title>Store</title>
<para>A Store hosts a MemStore and 0 or more StoreFiles.
StoreFiles are HFiles.
</para>
<section xml:id="hfile">
<title>HFile</title>
<section><title>HFile Format</title>
<para>The <emphasis>hfile</emphasis> file format is based on
the SSTable file described in the <link xlink:href="http://labs.google.com/papers/bigtable.html">BigTable [2006]</link> paper and on
Hadoop's <link xlink:href="http://hadoop.apache.org/common/docs/current/api/org/apache/hadoop/io/file/tfile/TFile.html">tfile</link>
(The unit test suite and the compression harness were taken directly from tfile).
See Schubert Zhang's blog post on <link xlink:ref="http://cloudepr.blogspot.com/2009/09/hfile-block-indexed-file-format-to.html">HFile: A Block-Indexed File Format to Store Sorted Key-Value Pairs</link> for a thorough introduction.
</para>
</section>
<section xml:id="hfile_tool">
<title>HFile Tool</title>
<para>To view a textualized version of hfile content, you can do use
the <classname>org.apache.hadoop.hbase.io.hfile.HFile
</classname>tool. Type the following to see usage:<programlisting><code>$ ${HBASE_HOME}/bin/hbase org.apache.hadoop.hbase.io.hfile.HFile </code> </programlisting>For
example, to view the content of the file
<filename>hdfs://10.81.47.41:9000/hbase/TEST/1418428042/DSMP/4759508618286845475</filename>,
type the following:<programlisting> <code>$ ${HBASE_HOME}/bin/hbase org.apache.hadoop.hbase.io.hfile.HFile -v -f hdfs://10.81.47.41:9000/hbase/TEST/1418428042/DSMP/4759508618286845475 </code> </programlisting>If
you leave off the option -v to see just a summary on the hfile. See
usage for other things to do with the <classname>HFile</classname>
tool.</para>
</section>
</section>
</section>
</section>
</chapter>
<chapter xml:id="wal">
<title >The WAL</title>
<subtitle>HBase's<link
xlink:href="http://en.wikipedia.org/wiki/Write-ahead_logging"> Write-Ahead
Log</link></subtitle>
<para>Each RegionServer adds updates to its Write-ahead Log (WAL)
first, and then to memory.</para>
<section>
<title>What is the purpose of the HBase WAL</title>
<para>
See the Wikipedia
<link xlink:href="http://en.wikipedia.org/wiki/Write-ahead_logging">Write-Ahead
Log</link> article.
</para>
</section>
<section xml:id="wal_splitting">
<title>WAL splitting</title>
<subtitle>How edits are recovered from a crashed RegionServer</subtitle>
<para>When a RegionServer crashes, it will lose its ephemeral lease in
ZooKeeper...TODO</para>
<section>
<title><varname>hbase.hlog.split.skip.errors</varname></title>
<para>When set to <constant>true</constant>, the default, any error
encountered splitting will be logged, the problematic WAL will be
moved into the <filename>.corrupt</filename> directory under the hbase
<varname>rootdir</varname>, and processing will continue. If set to
<constant>false</constant>, the exception will be propagated and the
split logged as failed.<footnote>
<para>See <link
xlink:href="https://issues.apache.org/jira/browse/HBASE-2958">HBASE-2958
When hbase.hlog.split.skip.errors is set to false, we fail the
split but thats it</link>. We need to do more than just fail split
if this flag is set.</para>
</footnote></para>
</section>
<section>
<title>How EOFExceptions are treated when splitting a crashed
RegionServers' WALs</title>
<para>If we get an EOF while splitting logs, we proceed with the split
even when <varname>hbase.hlog.split.skip.errors</varname> ==
<constant>false</constant>. An EOF while reading the last log in the
set of files to split is near-guaranteed since the RegionServer likely
crashed mid-write of a record. But we'll continue even if we got an
EOF reading other than the last file in the set.<footnote>
<para>For background, see <link
xlink:href="https://issues.apache.org/jira/browse/HBASE-2643">HBASE-2643
Figure how to deal with eof splitting logs</link></para>
</footnote></para>
</section>
</section>
</chapter>
<chapter xml:id="blooms">
<title>Bloom Filters</title>
<para>Bloom filters were developed over in <link
xlink:href="https://issues.apache.org/jira/browse/HBASE-1200">HBase-1200
Add bloomfilters</link>.<footnote>
<para>For description of the development process -- why static blooms
rather than dynamic -- and for an overview of the unique properties
that pertain to blooms in HBase, as well as possible future
directions, see the <emphasis>Development Process</emphasis> section
of the document <link
xlink:href="https://issues.apache.org/jira/secure/attachment/12444007/Bloom_Filters_in_HBase.pdf">BloomFilters
in HBase</link> attached to <link
xlink:href="https://issues.apache.org/jira/browse/HBASE-1200">HBase-1200</link>.</para>
</footnote><footnote>
<para>The bloom filters described here are actually version two of
blooms in HBase. In versions up to 0.19.x, HBase had a dynamic bloom
option based on work done by the <link
xlink:href="http://www.one-lab.org">European Commission One-Lab
Project 034819</link>. The core of the HBase bloom work was later
pulled up into Hadoop to implement org.apache.hadoop.io.BloomMapFile.
Version 1 of HBase blooms never worked that well. Version 2 is a
rewrite from scratch though again it starts with the one-lab
work.</para>
</footnote></para>
<section>
<title>Configurations</title>
<para>Blooms are enabled by specifying options on a column family in the
HBase shell or in java code as specification on
<classname>org.apache.hadoop.hbase.HColumnDescriptor</classname>.</para>
<section>
<title><code>HColumnDescriptor</code> option</title>
<para>Use <code>HColumnDescriptor.setBloomFilterType(NONE | ROW |
ROWCOL)</code> to enable blooms per Column Family. Default =
<varname>NONE</varname> for no bloom filters. If
<varname>ROW</varname>, the hash of the row will be added to the bloom
on each insert. If <varname>ROWCOL</varname>, the hash of the row +
column family + column family qualifier will be added to the bloom on
each key insert.</para>
</section>
<section>
<title><varname>io.hfile.bloom.enabled</varname> global kill
switch</title>
<para><code>io.hfile.bloom.enabled</code> in
<classname>Configuration</classname> serves as the kill switch in case
something goes wrong. Default = <varname>true</varname>.</para>
</section>
<section>
<title><varname>io.hfile.bloom.error.rate</varname></title>
<para><varname>io.hfile.bloom.error.rate</varname> = average false
positive rate. Default = 1%. Decrease rate by ½ (e.g. to .5%) == +1
bit per bloom entry.</para>
</section>
<section>
<title><varname>io.hfile.bloom.max.fold</varname></title>
<para><varname>io.hfile.bloom.max.fold</varname> = guaranteed minimum
fold rate. Most people should leave this alone. Default = 7, or can
collapse to at least 1/128th of original size. See the
<emphasis>Development Process</emphasis> section of the document <link
xlink:href="https://issues.apache.org/jira/secure/attachment/12444007/Bloom_Filters_in_HBase.pdf">BloomFilters
in HBase</link> for more on what this option means.</para>
</section>
</section>
<section xml:id="bloom_footprint">
<title>Bloom StoreFile footprint</title>
<para>Bloom filters add an entry to the <classname>StoreFile</classname>
general <classname>FileInfo</classname> data structure and then two
extra entries to the <classname>StoreFile</classname> metadata
section.</para>
<section>
<title>BloomFilter in the <classname>StoreFile</classname>
<classname>FileInfo</classname> data structure</title>
<section>
<title><varname>BLOOM_FILTER_TYPE</varname></title>
<para><classname>FileInfo</classname> has a
<varname>BLOOM_FILTER_TYPE</varname> entry which is set to
<varname>NONE</varname>, <varname>ROW</varname> or
<varname>ROWCOL.</varname></para>
</section>
</section>
<section>
<title>BloomFilter entries in <classname>StoreFile</classname>
metadata</title>
<section>
<title><varname>BLOOM_FILTER_META</varname></title>
<para><varname>BLOOM_FILTER_META</varname> holds Bloom Size, Hash
Function used, etc. Its small in size and is cached on
<classname>StoreFile.Reader</classname> load</para>
</section>
<section>
<title><varname>BLOOM_FILTER_DATA</varname></title>
<para><varname>BLOOM_FILTER_DATA</varname> is the actual bloomfilter
data. Obtained on-demand. Stored in the LRU cache, if it is enabled
(Its enabled by default).</para>
</section>
</section>
</section>
</chapter>
<appendix xml:id="tools">
<title >Tools</title>
<para>Here we list HBase tools for administration, analysis, fixup, and
debugging.</para>
<section xml:id="hbck">
<title>HBase <application>hbck</application></title>
<subtitle>An <emphasis>fsck</emphasis> for your HBase install</subtitle>
<para>To run <application>hbck</application> against your HBase cluster run
<programlisting>$ ./bin/hbase hbck</programlisting>
At the end of the commands output it prints <emphasis>OK</emphasis>
or <emphasis>INCONSISTENCY</emphasis>. If your cluster reports
inconsistencies, pass <command>-details</command> to see more detail emitted.
If inconsistencies, run <command>hbck</command> a few times because the
inconsistency may be transient (e.g. cluster is starting up or a region is
splitting).
Passing <command>-fix</command> may correct the inconsistency (This latter
is an experimental feature).
</para>
</section>
<section><title>HFile Tool</title>
<para>See <link linkend="hfile_tool" >HFile Tool</link>.</para>
</section>
<section xml:id="wal_tools">
<title>WAL Tools</title>
<section xml:id="hlog_tool">
<title><classname>HLog</classname> tool</title>
<para>The main method on <classname>HLog</classname> offers manual
split and dump facilities. Pass it WALs or the product of a split, the
content of the <filename>recovered.edits</filename>. directory.</para>
<para>You can get a textual dump of a WAL file content by doing the
following:<programlisting> <code>$ ./bin/hbase org.apache.hadoop.hbase.regionserver.wal.HLog --dump hdfs://example.org:9000/hbase/.logs/example.org,60020,1283516293161/10.10.21.10%3A60020.1283973724012</code> </programlisting>The
return code will be non-zero if issues with the file so you can test
wholesomeness of file by redirecting <varname>STDOUT</varname> to
<code>/dev/null</code> and testing the program return.</para>
<para>Similarily you can force a split of a log file directory by
doing:<programlisting> $ ./<code>bin/hbase org.apache.hadoop.hbase.regionserver.wal.HLog --split hdfs://example.org:9000/hbase/.logs/example.org,60020,1283516293161/</code></programlisting></para>
</section>
</section>
</appendix>
<appendix xml:id="compression">
<title >Compression</title>
<para>TODO: Compression in hbase...</para>
<section>
<title>
LZO
</title>
<para>
Running with LZO enabled is recommended though HBase does not ship with
LZO because of licensing issues. To install LZO and verify its installation
and that its available to HBase, do the following...
</para>
</section>
<section id="hbase.regionserver.codecs">
<title>
<varname>
hbase.regionserver.codecs
</varname>
</title>
<para>
To have a RegionServer test a set of codecs and fail-to-start if any
code is missing or misinstalled, add the configuration
<varname>
hbase.regionserver.codecs
</varname>
to your <filename>hbase-site.xml</filename> with a value of
codecs to test on startup. For example if the
<varname>
hbase.regionserver.codecs
</varname> value is <code>lzo,gz</code> and if lzo is not present
or improperly installed, the misconfigured RegionServer will fail
to start.
</para>
<para>
Administrators might make use of this facility to guard against
the case where a new server is added to cluster but the cluster
requires install of a particular coded.
</para>
</section>
</appendix>
<appendix xml:id="faq">
<title >FAQ</title>
<qandaset defaultlabel='faq'>
<qandadiv><title>General</title>
<qandaentry>
<question><para>Are there other HBase FAQs?</para></question>
<answer>
<para>
See the FAQ that is up on the wiki, <link xlink:href="http://wiki.apache.org/hadoop/Hbase/FAQ">HBase Wiki FAQ</link>
as well as the <link xlink:href="http://wiki.apache.org/hadoop/Hbase/Troubleshooting">Troubleshooting</link> page and
the <link xlink:href="http://wiki.apache.org/hadoop/Hbase/FrequentlySeenErrors">Frequently Seen Errors</link> page.
</para>
</answer>
</qandaentry>
</qandadiv>
<qandadiv xml:id="ec2"><title>EC2</title>
<qandaentry>
<question><para>
Why doesn't my remote java connection into my ec2 cluster work?
</para></question>
<answer>
<para>
See Andrew's answer here, up on the user list: <link xlink:href="http://search-hadoop.com/m/sPdqNFAwyg2">Remote Java client connection into EC2 instance</link>.
</para>
</answer>
</qandaentry>
</qandadiv>
<qandadiv><title>Building HBase</title>
<qandaentry>
<question><para>
When I build, why do I always get <code>Unable to find resource 'VM_global_library.vm'</code>?
</para></question>
<answer>
<para>
Ignore it. Its not an error. It is <link xlink:href="http://jira.codehaus.org/browse/MSITE-286">officially ugly</link> though.
</para>
</answer>
</qandaentry>
</qandadiv>
<qandadiv><title>Upgrading your HBase</title>
<qandaentry>
<question xml:id="0_90_upgrade"><para>
Whats involved upgrading to HBase 0.90.x from 0.89.x or from 0.20.x?
</para></question>
<answer>
<para>This version of 0.90.x HBase can be started on data written by
HBase 0.20.x or HBase 0.89.x. There is no need of a migration step.
HBase 0.89.x and 0.90.x does write out the name of region directories
differently -- it names them with a md5 hash of the region name rather
than a jenkins hash -- so this means that once started, there is no
going back to HBase 0.20.x.
</para>
</answer>
</qandaentry>
</qandadiv>
</qandaset>
</appendix>
<index xml:id="book_index">
<title>Index</title>
</index>
</book>