| FROM sbtscala/scala-sbt:eclipse-temurin-jammy-11.0.17_8_1.9.3_2.13.11 AS build |
| |
| # Set working directory |
| WORKDIR /core |
| |
| # Copy all projects under core to /core |
| COPY core/ . |
| |
| # Update system and install dependencies |
| RUN apt-get update && apt-get install -y \ |
| netcat \ |
| unzip \ |
| libpq-dev \ |
| && apt-get clean |
| |
| WORKDIR /core |
| # Add .git for runtime calls to jgit from OPversion |
| COPY .git ../.git |
| |
| RUN sbt clean WorkflowExecutionService/dist |
| |
| # Unzip the texera binary |
| RUN unzip amber/target/universal/texera-0.1-SNAPSHOT.zip -d amber/target/ |
| |
| FROM eclipse-temurin:11-jre-jammy AS runtime |
| |
| WORKDIR /core/amber |
| |
| COPY --from=build /core/amber/r-requirements.txt /tmp/r-requirements.txt |
| COPY --from=build /core/amber/requirements.txt /tmp/requirements.txt |
| COPY --from=build /core/amber/operator-requirements.txt /tmp/operator-requirements.txt |
| |
| # Install Python & R runtime dependencies |
| RUN apt-get update && apt-get install -y \ |
| python3-pip \ |
| python3-dev \ |
| libpq-dev \ |
| gfortran \ |
| curl \ |
| build-essential \ |
| libreadline-dev \ |
| libncurses-dev \ |
| libssl-dev \ |
| libxml2-dev \ |
| xorg-dev \ |
| libbz2-dev \ |
| liblzma-dev \ |
| libpcre++-dev \ |
| libpango1.0-dev \ |
| libcurl4-openssl-dev \ |
| unzip \ |
| && apt-get clean |
| |
| # Install R and needed libraries |
| ENV R_VERSION=4.3.3 |
| RUN curl -O https://cran.r-project.org/src/base/R-4/R-${R_VERSION}.tar.gz && \ |
| tar -xf R-${R_VERSION}.tar.gz && \ |
| cd R-${R_VERSION} && \ |
| ./configure --prefix=/usr/local \ |
| --enable-R-shlib \ |
| --with-blas \ |
| --with-lapack && \ |
| make -j 4 && \ |
| make install && \ |
| cd .. && \ |
| rm -rf R-${R_VERSION}* && R --version && pip3 install --upgrade pip setuptools wheel&& \ |
| pip3 install -r /tmp/requirements.txt && \ |
| pip3 install -r /tmp/operator-requirements.txt && \ |
| pip3 install -r /tmp/r-requirements.txt |
| RUN Rscript -e "options(repos = c(CRAN = 'https://cran.r-project.org')); \ |
| install.packages(c('coro', 'arrow'), \ |
| Ncpus = parallel::detectCores())" |
| ENV LD_LIBRARY_PATH=/usr/local/lib/R/lib:$LD_LIBRARY_PATH |
| |
| # Copy the built texera binary from the build phase |
| COPY --from=build /.git /.git |
| COPY --from=build /core/amber/target/texera-0.1-SNAPSHOT /core/amber |
| # Copy resources directories under /core from build phase |
| COPY --from=build /core/amber/src/main/resources /core/amber/src/main/resources |
| COPY --from=build /core/workflow-core/src/main/resources /core/workflow-core/src/main/resources |
| COPY --from=build /core/file-service/src/main/resources /core/file-service/src/main/resources |
| # Copy code for python & R UDF |
| COPY --from=build /core/amber/src/main/python /core/amber/src/main/python |
| |
| CMD ["bin/computing-unit-master"] |
| |
| EXPOSE 8085 |