[SYSTEMDS-2794] Custom dense reader for compression

This commit change the readers for the dense matrix blocks to circumvent
the usual, quickgetvalue() method. This significantly increase the reading
but required adding a single block and multiBlock reader.

Another optimization lead from this optimized reader is that transpose
now only reduce execution time of the compression when the input matrix
is dense. Therefore the heuristic of the compression is set to reflect.

Finally all readers are now hidden inside its own subfolder and have a
clean one point entry for construction, that automatically select the
optimal reader.

Closes #1156
30 files changed
tree: 8f50e6cc404224179c1fffc81e2957f64e4654b1
  1. .github/
  2. bin/
  3. conf/
  4. dev/
  5. docker/
  6. docs/
  7. notebooks/
  8. scripts/
  9. src/
  10. .gitattributes
  11. .gitignore
  12. .gitmodules
  13. CONTRIBUTING.md
  14. LICENSE
  15. NOTICE
  16. pom.xml
  17. README.md
README.md

Apache SystemDS

Overview: SystemDS is a versatile system for the end-to-end data science lifecycle from data integration, cleaning, and feature engineering, over efficient, local and distributed ML model training, to deployment and serving. To this end, we aim to provide a stack of declarative languages with R-like syntax for (1) the different tasks of the data-science lifecycle, and (2) users with different expertise. These high-level scripts are compiled into hybrid execution plans of local, in-memory CPU and GPU operations, as well as distributed operations on Apache Spark. In contrast to existing systems - that either provide homogeneous tensors or 2D Datasets - and in order to serve the entire data science lifecycle, the underlying data model are DataTensors, i.e., tensors (multi-dimensional arrays) whose first dimension may have a heterogeneous and nested schema.

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