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# to you under the Apache License, Version 2.0 (the
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# with the License. You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
# software distributed under the License is distributed on an
# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
# KIND, either express or implied. See the License for the
# specific language governing permissions and limitations
# under the License.
import re
import urllib
from datetime import datetime
from typing import Any, Dict, List, Optional, Pattern, Tuple, Type, TYPE_CHECKING
import pandas as pd
from apispec import APISpec
from apispec.ext.marshmallow import MarshmallowPlugin
from flask_babel import gettext as __
from marshmallow import fields, Schema
from marshmallow.exceptions import ValidationError
from sqlalchemy import literal_column
from sqlalchemy.engine.url import make_url
from sqlalchemy.sql.expression import ColumnClause
from typing_extensions import TypedDict
from superset.databases.schemas import encrypted_field_properties, EncryptedField
from superset.db_engine_specs.base import BaseEngineSpec
from superset.db_engine_specs.exceptions import SupersetDBAPIDisconnectionError
from superset.errors import SupersetError, SupersetErrorType
from superset.sql_parse import Table
from superset.utils import core as utils
from superset.utils.hashing import md5_sha_from_str
if TYPE_CHECKING:
from superset.models.core import Database # pragma: no cover
CONNECTION_DATABASE_PERMISSIONS_REGEX = re.compile(
"Access Denied: Project User does not have bigquery.jobs.create "
+ "permission in project (?P<project>.+?)"
)
TABLE_DOES_NOT_EXIST_REGEX = re.compile(
'Table name "(?P<table>.*?)" missing dataset while no default '
"dataset is set in the request"
)
COLUMN_DOES_NOT_EXIST_REGEX = re.compile(
r"Unrecognized name: (?P<column>.*?) at \[(?P<location>.+?)\]"
)
SCHEMA_DOES_NOT_EXIST_REGEX = re.compile(
r"bigquery error: 404 Not found: Dataset (?P<dataset>.*?):"
r"(?P<schema>.*?) was not found in location"
)
SYNTAX_ERROR_REGEX = re.compile(
'Syntax error: Expected end of input but got identifier "(?P<syntax_error>.+?)"'
)
ma_plugin = MarshmallowPlugin()
class BigQueryParametersSchema(Schema):
credentials_info = EncryptedField(
required=False, description="Contents of BigQuery JSON credentials.",
)
query = fields.Dict(required=False)
class BigQueryParametersType(TypedDict):
credentials_info: Dict[str, Any]
query: Dict[str, Any]
class BigQueryEngineSpec(BaseEngineSpec):
"""Engine spec for Google's BigQuery
As contributed by @mxmzdlv on issue #945"""
engine = "bigquery"
engine_name = "Google BigQuery"
max_column_name_length = 128
parameters_schema = BigQueryParametersSchema()
default_driver = "bigquery"
sqlalchemy_uri_placeholder = "bigquery://{project_id}"
# BigQuery doesn't maintain context when running multiple statements in the
# same cursor, so we need to run all statements at once
run_multiple_statements_as_one = True
"""
https://www.python.org/dev/peps/pep-0249/#arraysize
raw_connections bypass the pybigquery query execution context and deal with
raw dbapi connection directly.
If this value is not set, the default value is set to 1, as described here,
https://googlecloudplatform.github.io/google-cloud-python/latest/_modules/google/cloud/bigquery/dbapi/cursor.html#Cursor
The default value of 5000 is derived from the pybigquery.
https://github.com/mxmzdlv/pybigquery/blob/d214bb089ca0807ca9aaa6ce4d5a01172d40264e/pybigquery/sqlalchemy_bigquery.py#L102
"""
arraysize = 5000
_date_trunc_functions = {
"DATE": "DATE_TRUNC",
"DATETIME": "DATETIME_TRUNC",
"TIME": "TIME_TRUNC",
"TIMESTAMP": "TIMESTAMP_TRUNC",
}
_time_grain_expressions = {
None: "{col}",
"PT1S": "{func}({col}, SECOND)",
"PT1M": "{func}({col}, MINUTE)",
"PT5M": "CAST(TIMESTAMP_SECONDS("
"5*60 * DIV(UNIX_SECONDS(CAST({col} AS TIMESTAMP)), 5*60)"
") AS {type})",
"PT10M": "CAST(TIMESTAMP_SECONDS("
"10*60 * DIV(UNIX_SECONDS(CAST({col} AS TIMESTAMP)), 10*60)"
") AS {type})",
"PT15M": "CAST(TIMESTAMP_SECONDS("
"15*60 * DIV(UNIX_SECONDS(CAST({col} AS TIMESTAMP)), 15*60)"
") AS {type})",
"PT0.5H": "CAST(TIMESTAMP_SECONDS("
"30*60 * DIV(UNIX_SECONDS(CAST({col} AS TIMESTAMP)), 30*60)"
") AS {type})",
"PT1H": "{func}({col}, HOUR)",
"P1D": "{func}({col}, DAY)",
"P1W": "{func}({col}, WEEK)",
"P1M": "{func}({col}, MONTH)",
"P0.25Y": "{func}({col}, QUARTER)",
"P1Y": "{func}({col}, YEAR)",
}
custom_errors: Dict[Pattern[str], Tuple[str, SupersetErrorType, Dict[str, Any]]] = {
CONNECTION_DATABASE_PERMISSIONS_REGEX: (
__(
"We were unable to connect to your database. Please "
"confirm that your service account has the Viewer "
"and Job User roles on the project."
),
SupersetErrorType.CONNECTION_DATABASE_PERMISSIONS_ERROR,
{},
),
TABLE_DOES_NOT_EXIST_REGEX: (
__(
'The table "%(table)s" does not exist. '
"A valid table must be used to run this query.",
),
SupersetErrorType.TABLE_DOES_NOT_EXIST_ERROR,
{},
),
COLUMN_DOES_NOT_EXIST_REGEX: (
__('We can\'t seem to resolve column "%(column)s" at line %(location)s.'),
SupersetErrorType.COLUMN_DOES_NOT_EXIST_ERROR,
{},
),
SCHEMA_DOES_NOT_EXIST_REGEX: (
__(
'The schema "%(schema)s" does not exist. '
"A valid schema must be used to run this query."
),
SupersetErrorType.SCHEMA_DOES_NOT_EXIST_ERROR,
{},
),
SYNTAX_ERROR_REGEX: (
__(
"Please check your query for syntax errors at or near "
'"%(syntax_error)s". Then, try running your query again.'
),
SupersetErrorType.SYNTAX_ERROR,
{},
),
}
@classmethod
def convert_dttm(cls, target_type: str, dttm: datetime) -> Optional[str]:
tt = target_type.upper()
if tt == utils.TemporalType.DATE:
return f"CAST('{dttm.date().isoformat()}' AS DATE)"
if tt == utils.TemporalType.DATETIME:
return f"""CAST('{dttm.isoformat(timespec="microseconds")}' AS DATETIME)"""
if tt == utils.TemporalType.TIME:
return f"""CAST('{dttm.strftime("%H:%M:%S.%f")}' AS TIME)"""
if tt == utils.TemporalType.TIMESTAMP:
return f"""CAST('{dttm.isoformat(timespec="microseconds")}' AS TIMESTAMP)"""
return None
@classmethod
def fetch_data(
cls, cursor: Any, limit: Optional[int] = None
) -> List[Tuple[Any, ...]]:
data = super().fetch_data(cursor, limit)
# Support type BigQuery Row, introduced here PR #4071
# google.cloud.bigquery.table.Row
if data and type(data[0]).__name__ == "Row":
data = [r.values() for r in data] # type: ignore
return data
@staticmethod
def _mutate_label(label: str) -> str:
"""
BigQuery field_name should start with a letter or underscore and contain only
alphanumeric characters. Labels that start with a number are prefixed with an
underscore. Any unsupported characters are replaced with underscores and an
md5 hash is added to the end of the label to avoid possible collisions.
:param label: Expected expression label
:return: Conditionally mutated label
"""
label_hashed = "_" + md5_sha_from_str(label)
# if label starts with number, add underscore as first character
label_mutated = "_" + label if re.match(r"^\d", label) else label
# replace non-alphanumeric characters with underscores
label_mutated = re.sub(r"[^\w]+", "_", label_mutated)
if label_mutated != label:
# add first 5 chars from md5 hash to label to avoid possible collisions
label_mutated += label_hashed[:6]
return label_mutated
@classmethod
def _truncate_label(cls, label: str) -> str:
"""BigQuery requires column names start with either a letter or
underscore. To make sure this is always the case, an underscore is prefixed
to the md5 hash of the original label.
:param label: expected expression label
:return: truncated label
"""
return "_" + md5_sha_from_str(label)
@classmethod
def normalize_indexes(cls, indexes: List[Dict[str, Any]]) -> List[Dict[str, Any]]:
"""
Normalizes indexes for more consistency across db engines
:param indexes: Raw indexes as returned by SQLAlchemy
:return: cleaner, more aligned index definition
"""
normalized_idxs = []
# Fixing a bug/behavior observed in pybigquery==0.4.15 where
# the index's `column_names` == [None]
# Here we're returning only non-None indexes
for ix in indexes:
column_names = ix.get("column_names") or []
ix["column_names"] = [col for col in column_names if col is not None]
if ix["column_names"]:
normalized_idxs.append(ix)
return normalized_idxs
@classmethod
def extra_table_metadata(
cls, database: "Database", table_name: str, schema_name: str
) -> Dict[str, Any]:
indexes = database.get_indexes(table_name, schema_name)
if not indexes:
return {}
partitions_columns = [
index.get("column_names", [])
for index in indexes
if index.get("name") == "partition"
]
cluster_columns = [
index.get("column_names", [])
for index in indexes
if index.get("name") == "clustering"
]
return {
"partitions": {"cols": partitions_columns},
"clustering": {"cols": cluster_columns},
}
@classmethod
def _get_fields(cls, cols: List[Dict[str, Any]]) -> List[ColumnClause]:
"""
BigQuery dialect requires us to not use backtick in the fieldname which are
nested.
Using literal_column handles that issue.
https://docs.sqlalchemy.org/en/latest/core/tutorial.html#using-more-specific-text-with-table-literal-column-and-column
Also explicility specifying column names so we don't encounter duplicate
column names in the result.
"""
return [
literal_column(c["name"]).label(c["name"].replace(".", "__")) for c in cols
]
@classmethod
def epoch_to_dttm(cls) -> str:
return "TIMESTAMP_SECONDS({col})"
@classmethod
def epoch_ms_to_dttm(cls) -> str:
return "TIMESTAMP_MILLIS({col})"
@classmethod
def df_to_sql(
cls,
database: "Database",
table: Table,
df: pd.DataFrame,
to_sql_kwargs: Dict[str, Any],
) -> None:
"""
Upload data from a Pandas DataFrame to a database.
Calls `pandas_gbq.DataFrame.to_gbq` which requires `pandas_gbq` to be installed.
Note this method does not create metadata for the table.
:param database: The database to upload the data to
:param table: The table to upload the data to
:param df: The dataframe with data to be uploaded
:param to_sql_kwargs: The kwargs to be passed to pandas.DataFrame.to_sql` method
"""
try:
# pylint: disable=import-outside-toplevel
import pandas_gbq
from google.oauth2 import service_account
except ImportError as ex:
raise Exception(
"Could not import libraries `pandas_gbq` or `google.oauth2`, which are "
"required to be installed in your environment in order "
"to upload data to BigQuery"
) from ex
if not table.schema:
raise Exception("The table schema must be defined")
engine = cls.get_engine(database)
to_gbq_kwargs = {"destination_table": str(table), "project_id": engine.url.host}
# Add credentials if they are set on the SQLAlchemy dialect.
creds = engine.dialect.credentials_info
if creds:
to_gbq_kwargs[
"credentials"
] = service_account.Credentials.from_service_account_info(creds)
# Only pass through supported kwargs.
supported_kwarg_keys = {"if_exists"}
for key in supported_kwarg_keys:
if key in to_sql_kwargs:
to_gbq_kwargs[key] = to_sql_kwargs[key]
pandas_gbq.to_gbq(df, **to_gbq_kwargs)
@classmethod
def build_sqlalchemy_uri(
cls,
parameters: BigQueryParametersType,
encrypted_extra: Optional[Dict[str, Any]] = None,
) -> str:
query = parameters.get("query", {})
query_params = urllib.parse.urlencode(query)
if not encrypted_extra:
raise ValidationError("Missing service credentials")
project_id = encrypted_extra.get("credentials_info", {}).get("project_id")
if project_id:
return f"{cls.default_driver}://{project_id}/?{query_params}"
raise ValidationError("Invalid service credentials")
@classmethod
def get_parameters_from_uri(
cls, uri: str, encrypted_extra: Optional[Dict[str, str]] = None
) -> Any:
value = make_url(uri)
# Building parameters from encrypted_extra and uri
if encrypted_extra:
return {**encrypted_extra, "query": value.query}
raise ValidationError("Invalid service credentials")
@classmethod
def get_dbapi_exception_mapping(cls) -> Dict[Type[Exception], Type[Exception]]:
# pylint: disable=import-error,import-outside-toplevel
from google.auth.exceptions import DefaultCredentialsError
return {DefaultCredentialsError: SupersetDBAPIDisconnectionError}
@classmethod
def validate_parameters(
cls, parameters: BigQueryParametersType # pylint: disable=unused-argument
) -> List[SupersetError]:
return []
@classmethod
def parameters_json_schema(cls) -> Any:
"""
Return configuration parameters as OpenAPI.
"""
if not cls.parameters_schema:
return None
spec = APISpec(
title="Database Parameters",
version="1.0.0",
openapi_version="3.0.0",
plugins=[ma_plugin],
)
ma_plugin.init_spec(spec)
ma_plugin.converter.add_attribute_function(encrypted_field_properties)
spec.components.schema(cls.__name__, schema=cls.parameters_schema)
return spec.to_dict()["components"]["schemas"][cls.__name__]