blob: 6a1781a54713093aa21eb618af9f63bc9e1d88cf [file] [log] [blame]
<!DOCTYPE html><html lang="en"><head><meta charset="utf-8"><meta name="viewport" content="width=device-width, initial-scale=1.0"><meta name="generator" content="rustdoc"><meta name="description" content="Source of the Rust file `/root/.cargo/git/checkouts/incubator-teaclave-crates-c8106113f74feefc/ede1f68/rusty-machine/src/learning/logistic_reg.rs`."><meta name="keywords" content="rust, rustlang, rust-lang"><title>logistic_reg.rs - source</title><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../SourceSerif4-Regular.ttf.woff2"><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../FiraSans-Regular.woff2"><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../FiraSans-Medium.woff2"><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../SourceCodePro-Regular.ttf.woff2"><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../SourceSerif4-Bold.ttf.woff2"><link rel="preload" as="font" type="font/woff2" crossorigin href="../../../SourceCodePro-Semibold.ttf.woff2"><link rel="stylesheet" href="../../../normalize.css"><link rel="stylesheet" href="../../../rustdoc.css" id="mainThemeStyle"><link rel="stylesheet" href="../../../ayu.css" disabled><link rel="stylesheet" href="../../../dark.css" disabled><link rel="stylesheet" href="../../../light.css" id="themeStyle"><script id="default-settings" ></script><script src="../../../storage.js"></script><script defer src="../../../source-script.js"></script><script defer src="../../../source-files.js"></script><script defer src="../../../main.js"></script><noscript><link rel="stylesheet" href="../../../noscript.css"></noscript><link rel="alternate icon" type="image/png" href="../../../favicon-16x16.png"><link rel="alternate icon" type="image/png" href="../../../favicon-32x32.png"><link rel="icon" type="image/svg+xml" href="../../../favicon.svg"></head><body class="rustdoc source"><!--[if lte IE 11]><div class="warning">This old browser is unsupported and will most likely display funky things.</div><![endif]--><nav class="sidebar"><a class="sidebar-logo" href="../../../rusty_machine/index.html"><div class="logo-container"><img class="rust-logo" src="../../../rust-logo.svg" alt="logo"></div></a></nav><main><div class="width-limiter"><nav class="sub"><a class="sub-logo-container" href="../../../rusty_machine/index.html"><img class="rust-logo" src="../../../rust-logo.svg" alt="logo"></a><form class="search-form"><div class="search-container"><span></span><input class="search-input" name="search" autocomplete="off" spellcheck="false" placeholder="Click or press ‘S’ to search, ‘?’ for more options…" type="search"><div id="help-button" title="help" tabindex="-1"><a href="../../../help.html">?</a></div><div id="settings-menu" tabindex="-1"><a href="../../../settings.html" title="settings"><img width="22" height="22" alt="Change settings" src="../../../wheel.svg"></a></div></div></form></nav><section id="main-content" class="content"><div class="example-wrap"><pre class="src-line-numbers"><span id="1">1</span>
<span id="2">2</span>
<span id="3">3</span>
<span id="4">4</span>
<span id="5">5</span>
<span id="6">6</span>
<span id="7">7</span>
<span id="8">8</span>
<span id="9">9</span>
<span id="10">10</span>
<span id="11">11</span>
<span id="12">12</span>
<span id="13">13</span>
<span id="14">14</span>
<span id="15">15</span>
<span id="16">16</span>
<span id="17">17</span>
<span id="18">18</span>
<span id="19">19</span>
<span id="20">20</span>
<span id="21">21</span>
<span id="22">22</span>
<span id="23">23</span>
<span id="24">24</span>
<span id="25">25</span>
<span id="26">26</span>
<span id="27">27</span>
<span id="28">28</span>
<span id="29">29</span>
<span id="30">30</span>
<span id="31">31</span>
<span id="32">32</span>
<span id="33">33</span>
<span id="34">34</span>
<span id="35">35</span>
<span id="36">36</span>
<span id="37">37</span>
<span id="38">38</span>
<span id="39">39</span>
<span id="40">40</span>
<span id="41">41</span>
<span id="42">42</span>
<span id="43">43</span>
<span id="44">44</span>
<span id="45">45</span>
<span id="46">46</span>
<span id="47">47</span>
<span id="48">48</span>
<span id="49">49</span>
<span id="50">50</span>
<span id="51">51</span>
<span id="52">52</span>
<span id="53">53</span>
<span id="54">54</span>
<span id="55">55</span>
<span id="56">56</span>
<span id="57">57</span>
<span id="58">58</span>
<span id="59">59</span>
<span id="60">60</span>
<span id="61">61</span>
<span id="62">62</span>
<span id="63">63</span>
<span id="64">64</span>
<span id="65">65</span>
<span id="66">66</span>
<span id="67">67</span>
<span id="68">68</span>
<span id="69">69</span>
<span id="70">70</span>
<span id="71">71</span>
<span id="72">72</span>
<span id="73">73</span>
<span id="74">74</span>
<span id="75">75</span>
<span id="76">76</span>
<span id="77">77</span>
<span id="78">78</span>
<span id="79">79</span>
<span id="80">80</span>
<span id="81">81</span>
<span id="82">82</span>
<span id="83">83</span>
<span id="84">84</span>
<span id="85">85</span>
<span id="86">86</span>
<span id="87">87</span>
<span id="88">88</span>
<span id="89">89</span>
<span id="90">90</span>
<span id="91">91</span>
<span id="92">92</span>
<span id="93">93</span>
<span id="94">94</span>
<span id="95">95</span>
<span id="96">96</span>
<span id="97">97</span>
<span id="98">98</span>
<span id="99">99</span>
<span id="100">100</span>
<span id="101">101</span>
<span id="102">102</span>
<span id="103">103</span>
<span id="104">104</span>
<span id="105">105</span>
<span id="106">106</span>
<span id="107">107</span>
<span id="108">108</span>
<span id="109">109</span>
<span id="110">110</span>
<span id="111">111</span>
<span id="112">112</span>
<span id="113">113</span>
<span id="114">114</span>
<span id="115">115</span>
<span id="116">116</span>
<span id="117">117</span>
<span id="118">118</span>
<span id="119">119</span>
<span id="120">120</span>
<span id="121">121</span>
<span id="122">122</span>
<span id="123">123</span>
<span id="124">124</span>
<span id="125">125</span>
<span id="126">126</span>
<span id="127">127</span>
<span id="128">128</span>
<span id="129">129</span>
<span id="130">130</span>
<span id="131">131</span>
<span id="132">132</span>
<span id="133">133</span>
<span id="134">134</span>
<span id="135">135</span>
<span id="136">136</span>
<span id="137">137</span>
<span id="138">138</span>
<span id="139">139</span>
<span id="140">140</span>
<span id="141">141</span>
<span id="142">142</span>
<span id="143">143</span>
<span id="144">144</span>
<span id="145">145</span>
<span id="146">146</span>
<span id="147">147</span>
<span id="148">148</span>
<span id="149">149</span>
<span id="150">150</span>
<span id="151">151</span>
<span id="152">152</span>
<span id="153">153</span>
<span id="154">154</span>
<span id="155">155</span>
<span id="156">156</span>
<span id="157">157</span>
<span id="158">158</span>
<span id="159">159</span>
<span id="160">160</span>
<span id="161">161</span>
<span id="162">162</span>
<span id="163">163</span>
<span id="164">164</span>
<span id="165">165</span>
<span id="166">166</span>
<span id="167">167</span>
<span id="168">168</span>
<span id="169">169</span>
<span id="170">170</span>
<span id="171">171</span>
<span id="172">172</span>
<span id="173">173</span>
<span id="174">174</span>
<span id="175">175</span>
<span id="176">176</span>
<span id="177">177</span>
<span id="178">178</span>
<span id="179">179</span>
<span id="180">180</span>
<span id="181">181</span>
<span id="182">182</span>
<span id="183">183</span>
<span id="184">184</span>
<span id="185">185</span>
<span id="186">186</span>
<span id="187">187</span>
<span id="188">188</span>
<span id="189">189</span>
<span id="190">190</span>
<span id="191">191</span>
<span id="192">192</span>
<span id="193">193</span>
<span id="194">194</span>
<span id="195">195</span>
<span id="196">196</span>
<span id="197">197</span>
<span id="198">198</span>
<span id="199">199</span>
<span id="200">200</span>
</pre><pre class="rust"><code><span class="doccomment">//! Logistic Regression module
//!
//! Contains implemention of logistic regression using
//! gradient descent optimization.
//!
//! The regressor will automatically add the intercept term
//! so you do not need to format the input matrices yourself.
//!
//! # Usage
//!
//! ```
//! use rusty_machine::learning::logistic_reg::LogisticRegressor;
//! use rusty_machine::learning::SupModel;
//! use rusty_machine::linalg::Matrix;
//! use rusty_machine::linalg::Vector;
//!
//! let inputs = Matrix::new(4,1,vec![1.0,3.0,5.0,7.0]);
//! let targets = Vector::new(vec![0.,0.,1.,1.]);
//!
//! let mut log_mod = LogisticRegressor::default();
//!
//! // Train the model
//! log_mod.train(&amp;inputs, &amp;targets).unwrap();
//!
//! // Now we&#39;ll predict a new point
//! let new_point = Matrix::new(1,1,vec![10.]);
//! let output = log_mod.predict(&amp;new_point).unwrap();
//!
//! // Hopefully we classified our new point correctly!
//! assert!(output[0] &gt; 0.5, &quot;Our classifier isn&#39;t very good!&quot;);
//! ```
//!
//! We could have been more specific about the learning of the model
//! by using the `new` constructor instead. This allows us to provide
//! a `GradientDesc` object with custom parameters.
</span><span class="kw">use </span>linalg::{Matrix, BaseMatrix};
<span class="kw">use </span>linalg::Vector;
<span class="kw">use </span>learning::{LearningResult, SupModel};
<span class="kw">use </span>learning::toolkit::activ_fn::{ActivationFunc, Sigmoid};
<span class="kw">use </span>learning::toolkit::cost_fn::{CostFunc, CrossEntropyError};
<span class="kw">use </span>learning::optim::grad_desc::GradientDesc;
<span class="kw">use </span>learning::optim::{OptimAlgorithm, Optimizable};
<span class="kw">use </span>learning::error::Error;
<span class="doccomment">/// Logistic Regression Model.
///
/// Contains option for optimized parameter.
</span><span class="attribute">#[derive(Debug)]
</span><span class="kw">pub struct </span>LogisticRegressor&lt;A&gt;
<span class="kw">where </span>A: OptimAlgorithm&lt;BaseLogisticRegressor&gt;
{
base: BaseLogisticRegressor,
alg: A,
}
<span class="doccomment">/// Constructs a default Logistic Regression model
/// using standard gradient descent.
</span><span class="kw">impl </span>Default <span class="kw">for </span>LogisticRegressor&lt;GradientDesc&gt; {
<span class="kw">fn </span>default() -&gt; LogisticRegressor&lt;GradientDesc&gt; {
LogisticRegressor {
base: BaseLogisticRegressor::new(),
alg: GradientDesc::default(),
}
}
}
<span class="kw">impl</span>&lt;A: OptimAlgorithm&lt;BaseLogisticRegressor&gt;&gt; LogisticRegressor&lt;A&gt; {
<span class="doccomment">/// Constructs untrained logistic regression model.
///
/// # Examples
///
/// ```
/// use rusty_machine::learning::logistic_reg::LogisticRegressor;
/// use rusty_machine::learning::optim::grad_desc::GradientDesc;
///
/// let gd = GradientDesc::default();
/// let mut logistic_mod = LogisticRegressor::new(gd);
/// ```
</span><span class="kw">pub fn </span>new(alg: A) -&gt; LogisticRegressor&lt;A&gt; {
LogisticRegressor {
base: BaseLogisticRegressor::new(),
alg: alg,
}
}
<span class="doccomment">/// Get the parameters from the model.
///
/// Returns an option that is None if the model has not been trained.
</span><span class="kw">pub fn </span>parameters(<span class="kw-2">&amp;</span><span class="self">self</span>) -&gt; <span class="prelude-ty">Option</span>&lt;<span class="kw-2">&amp;</span>Vector&lt;f64&gt;&gt; {
<span class="self">self</span>.base.parameters()
}
<span class="doccomment">/// Set the parameters in the model.
</span><span class="kw">pub fn </span>set_parameters(<span class="kw-2">&amp;mut </span><span class="self">self</span>, para: Vector&lt;f64&gt;) {
<span class="self">self</span>.base.set_parameters(para)
}
}
<span class="kw">impl</span>&lt;A&gt; SupModel&lt;Matrix&lt;f64&gt;, Vector&lt;f64&gt;&gt; <span class="kw">for </span>LogisticRegressor&lt;A&gt;
<span class="kw">where </span>A: OptimAlgorithm&lt;BaseLogisticRegressor&gt;
{
<span class="doccomment">/// Train the logistic regression model.
///
/// Takes training data and output values as input.
///
/// # Examples
///
/// ```
/// use rusty_machine::learning::logistic_reg::LogisticRegressor;
/// use rusty_machine::linalg::Matrix;
/// use rusty_machine::linalg::Vector;
/// use rusty_machine::learning::SupModel;
///
/// let mut logistic_mod = LogisticRegressor::default();
/// let inputs = Matrix::new(3,2, vec![1.0, 2.0, 1.0, 3.0, 1.0, 4.0]);
/// let targets = Vector::new(vec![5.0, 6.0, 7.0]);
///
/// logistic_mod.train(&amp;inputs, &amp;targets).unwrap();
/// ```
</span><span class="kw">fn </span>train(<span class="kw-2">&amp;mut </span><span class="self">self</span>, inputs: <span class="kw-2">&amp;</span>Matrix&lt;f64&gt;, targets: <span class="kw-2">&amp;</span>Vector&lt;f64&gt;) -&gt; LearningResult&lt;()&gt; {
<span class="kw">let </span>ones = Matrix::&lt;f64&gt;::ones(inputs.rows(), <span class="number">1</span>);
<span class="kw">let </span>full_inputs = ones.hcat(inputs);
<span class="kw">let </span>initial_params = <span class="macro">vec!</span>[<span class="number">0.5</span>; full_inputs.cols()];
<span class="kw">let </span>optimal_w = <span class="self">self</span>.alg.optimize(<span class="kw-2">&amp;</span><span class="self">self</span>.base, <span class="kw-2">&amp;</span>initial_params[..], <span class="kw-2">&amp;</span>full_inputs, targets);
<span class="self">self</span>.base.set_parameters(Vector::new(optimal_w));
<span class="prelude-val">Ok</span>(())
}
<span class="doccomment">/// Predict output value from input data.
///
/// Model must be trained before prediction can be made.
</span><span class="kw">fn </span>predict(<span class="kw-2">&amp;</span><span class="self">self</span>, inputs: <span class="kw-2">&amp;</span>Matrix&lt;f64&gt;) -&gt; LearningResult&lt;Vector&lt;f64&gt;&gt; {
<span class="kw">if let </span><span class="prelude-val">Some</span>(v) = <span class="self">self</span>.base.parameters() {
<span class="kw">let </span>ones = Matrix::&lt;f64&gt;::ones(inputs.rows(), <span class="number">1</span>);
<span class="kw">let </span>full_inputs = ones.hcat(inputs);
<span class="prelude-val">Ok</span>((full_inputs * v).apply(<span class="kw-2">&amp;</span>Sigmoid::func))
} <span class="kw">else </span>{
<span class="prelude-val">Err</span>(Error::new_untrained())
}
}
}
<span class="doccomment">/// The Base Logistic Regression model.
///
/// This struct cannot be instantianated and is used internally only.
</span><span class="attribute">#[derive(Debug)]
</span><span class="kw">pub struct </span>BaseLogisticRegressor {
parameters: <span class="prelude-ty">Option</span>&lt;Vector&lt;f64&gt;&gt;,
}
<span class="kw">impl </span>BaseLogisticRegressor {
<span class="doccomment">/// Construct a new BaseLogisticRegressor
/// with parameters set to None.
</span><span class="kw">fn </span>new() -&gt; BaseLogisticRegressor {
BaseLogisticRegressor { parameters: <span class="prelude-val">None </span>}
}
}
<span class="kw">impl </span>BaseLogisticRegressor {
<span class="doccomment">/// Returns a reference to the parameters.
</span><span class="kw">fn </span>parameters(<span class="kw-2">&amp;</span><span class="self">self</span>) -&gt; <span class="prelude-ty">Option</span>&lt;<span class="kw-2">&amp;</span>Vector&lt;f64&gt;&gt; {
<span class="self">self</span>.parameters.as_ref()
}
<span class="doccomment">/// Set the parameters to `Some` vector.
</span><span class="kw">fn </span>set_parameters(<span class="kw-2">&amp;mut </span><span class="self">self</span>, params: Vector&lt;f64&gt;) {
<span class="self">self</span>.parameters = <span class="prelude-val">Some</span>(params);
}
}
<span class="doccomment">/// Computing the gradient of the underlying Logistic
/// Regression model.
///
/// The gradient is given by
///
/// X&lt;sup&gt;T&lt;/sup&gt;(h(Xb) - y) / m
///
/// where `h` is the sigmoid function and `b` the underlying model parameters.
</span><span class="kw">impl </span>Optimizable <span class="kw">for </span>BaseLogisticRegressor {
<span class="kw">type </span>Inputs = Matrix&lt;f64&gt;;
<span class="kw">type </span>Targets = Vector&lt;f64&gt;;
<span class="kw">fn </span>compute_grad(<span class="kw-2">&amp;</span><span class="self">self</span>,
params: <span class="kw-2">&amp;</span>[f64],
inputs: <span class="kw-2">&amp;</span>Matrix&lt;f64&gt;,
targets: <span class="kw-2">&amp;</span>Vector&lt;f64&gt;)
-&gt; (f64, Vec&lt;f64&gt;) {
<span class="kw">let </span>beta_vec = Vector::new(params.to_vec());
<span class="kw">let </span>outputs = (inputs * beta_vec).apply(<span class="kw-2">&amp;</span>Sigmoid::func);
<span class="kw">let </span>cost = CrossEntropyError::cost(<span class="kw-2">&amp;</span>outputs, targets);
<span class="kw">let </span>grad = (inputs.transpose() * (outputs - targets)) / (inputs.rows() <span class="kw">as </span>f64);
(cost, grad.into_vec())
}
}
</code></pre></div>
</section></div></main><div id="rustdoc-vars" data-root-path="../../../" data-current-crate="rusty_machine" data-themes="ayu,dark,light" data-resource-suffix="" data-rustdoc-version="1.66.0-nightly (5c8bff74b 2022-10-21)" ></div></body></html>