| <?xml version="1.0"?> | |
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| <workflow xmlns="http://taverna.sf.net/2008/xml/t2flow" version="1" producedBy="taverna-2.2.0"><dataflow id="87aa4917-46ce-473e-b183-f7d4e1860d30" role="top"><name>Demonstrationofconfigurableiteration</name><inputPorts /><outputPorts><port><name>Output</name><annotations /></port></outputPorts><processors><processor><name>Colours</name><inputPorts /><outputPorts><port><name>value</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>stringconstant-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.stringconstant.StringConstantActivity</class><inputMap /><outputMap><map from="value" to="value" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean xmlns=""> | |
| <value>red ,green ,</value> | |
| </net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>0</initialDelay> | |
| <maxDelay>0</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross /></strategy></iteration></iterationStrategyStack></processor><processor><name>Animals</name><inputPorts /><outputPorts><port><name>value</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>stringconstant-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.stringconstant.StringConstantActivity</class><inputMap /><outputMap><map from="value" to="value" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean xmlns=""> | |
| <value>cat ,rabbit ,</value> | |
| </net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>0</initialDelay> | |
| <maxDelay>0</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross /></strategy></iteration></iterationStrategyStack></processor><processor><name>Shapes</name><inputPorts /><outputPorts><port><name>value</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>stringconstant-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.stringconstant.StringConstantActivity</class><inputMap /><outputMap><map from="value" to="value" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean xmlns=""> | |
| <value>square ,circular ,triangular ,</value> | |
| </net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>0</initialDelay> | |
| <maxDelay>0</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross /></strategy></iteration></iterationStrategyStack></processor><processor><name>ColoursLisr</name><inputPorts><port><name>string</name><depth>0</depth></port></inputPorts><outputPorts><port><name>split</name><depth>1</depth><granularDepth>1</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="string" to="string" /></inputMap><outputMap><map from="split" to="split" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
| <localworkerName>org.embl.ebi.escience.scuflworkers.java.SplitByRegex</localworkerName> | |
| <script>List split = new ArrayList(); | |
| if (!string.equals("")) { | |
| String regexString = ","; | |
| if (regex != void) { | |
| regexString = regex; | |
| } | |
| String[] result = string.split(regexString); | |
| for (int i = 0; i < result.length; i++) { | |
| split.add(result[i]); | |
| } | |
| } | |
| </script> | |
| <dependencies /> | |
| <classLoaderSharing>workflow</classLoaderSharing> | |
| <localDependencies /> | |
| <artifactDependencies /> | |
| <inputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>regex</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| </inputs> | |
| <outputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| <granularDepth>1</granularDepth> | |
| <name>split</name> | |
| <depth>1</depth> | |
| <mimeTypes> | |
| <string>l('text/plain')</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| </outputs> | |
| </net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>1000</initialDelay> | |
| <maxDelay>5000</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="string" depth="0" /></cross></strategy></iteration></iterationStrategyStack></processor><processor><name>AnimalsList</name><inputPorts><port><name>string</name><depth>0</depth></port></inputPorts><outputPorts><port><name>split</name><depth>1</depth><granularDepth>1</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="string" to="string" /></inputMap><outputMap><map from="split" to="split" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
| <localworkerName>org.embl.ebi.escience.scuflworkers.java.SplitByRegex</localworkerName> | |
| <script>List split = new ArrayList(); | |
| if (!string.equals("")) { | |
| String regexString = ","; | |
| if (regex != void) { | |
| regexString = regex; | |
| } | |
| String[] result = string.split(regexString); | |
| for (int i = 0; i < result.length; i++) { | |
| split.add(result[i]); | |
| } | |
| } | |
| </script> | |
| <dependencies /> | |
| <classLoaderSharing>workflow</classLoaderSharing> | |
| <localDependencies /> | |
| <artifactDependencies /> | |
| <inputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>regex</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| </inputs> | |
| <outputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| <granularDepth>1</granularDepth> | |
| <name>split</name> | |
| <depth>1</depth> | |
| <mimeTypes> | |
| <string>l('text/plain')</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| </outputs> | |
| </net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>1000</initialDelay> | |
| <maxDelay>5000</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="string" depth="0" /></cross></strategy></iteration></iterationStrategyStack></processor><processor><name>ShapesList</name><inputPorts><port><name>string</name><depth>0</depth></port></inputPorts><outputPorts><port><name>split</name><depth>1</depth><granularDepth>1</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="string" to="string" /></inputMap><outputMap><map from="split" to="split" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
| <localworkerName>org.embl.ebi.escience.scuflworkers.java.SplitByRegex</localworkerName> | |
| <script>List split = new ArrayList(); | |
| if (!string.equals("")) { | |
| String regexString = ","; | |
| if (regex != void) { | |
| regexString = regex; | |
| } | |
| String[] result = string.split(regexString); | |
| for (int i = 0; i < result.length; i++) { | |
| split.add(result[i]); | |
| } | |
| } | |
| </script> | |
| <dependencies /> | |
| <classLoaderSharing>workflow</classLoaderSharing> | |
| <localDependencies /> | |
| <artifactDependencies /> | |
| <inputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>regex</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| </inputs> | |
| <outputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| <granularDepth>1</granularDepth> | |
| <name>split</name> | |
| <depth>1</depth> | |
| <mimeTypes> | |
| <string>l('text/plain')</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| </outputs> | |
| </net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>1000</initialDelay> | |
| <maxDelay>5000</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="string" depth="0" /></cross></strategy></iteration></iterationStrategyStack></processor><processor><name>Concatenate_two_strings</name><inputPorts><port><name>string1</name><depth>0</depth></port><port><name>string2</name><depth>0</depth></port></inputPorts><outputPorts><port><name>output</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="string2" to="string2" /><map from="string1" to="string1" /></inputMap><outputMap><map from="output" to="output" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
| <localworkerName>org.embl.ebi.escience.scuflworkers.java.StringConcat</localworkerName> | |
| <script>output = string1 + string2;</script> | |
| <dependencies /> | |
| <classLoaderSharing>workflow</classLoaderSharing> | |
| <localDependencies /> | |
| <artifactDependencies /> | |
| <inputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string1</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string2</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| </inputs> | |
| <outputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| <granularDepth>0</granularDepth> | |
| <name>output</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| </outputs> | |
| </net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>1000</initialDelay> | |
| <maxDelay>5000</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><dot><port name="string1" depth="0" /><port name="string2" depth="0" /></dot></strategy></iteration></iterationStrategyStack></processor><processor><name>ShapeAnimals</name><inputPorts><port><name>string2</name><depth>0</depth></port><port><name>string1</name><depth>0</depth></port><port><name>string3</name><depth>0</depth></port></inputPorts><outputPorts><port><name>output</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="string2" to="string2" /><map from="string1" to="string1" /><map from="string3" to="string3" /></inputMap><outputMap><map from="output" to="output" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
| <localworkerName>org.embl.ebi.escience.scuflworkers.java.StringConcat</localworkerName> | |
| <script>output = string1 + string2 + string3;</script> | |
| <dependencies /> | |
| <classLoaderSharing>workflow</classLoaderSharing> | |
| <localDependencies /> | |
| <artifactDependencies /> | |
| <inputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string1</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string2</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>'text/plain'</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| <handledReferenceSchemes /> | |
| <translatedElementType>java.lang.String</translatedElementType> | |
| <allowsLiteralValues>true</allowsLiteralValues> | |
| <name>string3</name> | |
| <depth>0</depth> | |
| <mimeTypes> | |
| <string>text/plain</string> | |
| </mimeTypes> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
| </inputs> | |
| <outputs> | |
| <net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| <granularDepth>0</granularDepth> | |
| <name>output</name> | |
| <depth>0</depth> | |
| <mimeTypes /> | |
| </net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
| </outputs> | |
| </net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.HostInstitution"> | |
| <text>UserNameHere</text> | |
| </annotationBean> | |
| <date>2011-02-10 16:47:32.655 GMT</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain></annotations></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
| <maxJobs>1</maxJobs> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
| <backoffFactor>1.0</backoffFactor> | |
| <initialDelay>1000</initialDelay> | |
| <maxDelay>5000</maxDelay> | |
| <maxRetries>0</maxRetries> | |
| </net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.2</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="string1" depth="0" /><dot><port name="string3" depth="0" /><port name="string2" depth="0" /></dot></cross></strategy></iteration></iterationStrategyStack></processor></processors><conditions /><datalinks><datalink><sink type="processor"><processor>ColoursLisr</processor><port>string</port></sink><source type="processor"><processor>Colours</processor><port>value</port></source></datalink><datalink><sink type="processor"><processor>AnimalsList</processor><port>string</port></sink><source type="processor"><processor>Animals</processor><port>value</port></source></datalink><datalink><sink type="processor"><processor>ShapesList</processor><port>string</port></sink><source type="processor"><processor>Shapes</processor><port>value</port></source></datalink><datalink><sink type="processor"><processor>Concatenate_two_strings</processor><port>string1</port></sink><source type="processor"><processor>ColoursLisr</processor><port>split</port></source></datalink><datalink><sink type="processor"><processor>Concatenate_two_strings</processor><port>string2</port></sink><source type="processor"><processor>AnimalsList</processor><port>split</port></source></datalink><datalink><sink type="processor"><processor>ShapeAnimals</processor><port>string2</port></sink><source type="processor"><processor>Concatenate_two_strings</processor><port>output</port></source></datalink><datalink><sink type="processor"><processor>ShapeAnimals</processor><port>string1</port></sink><source type="processor"><processor>ShapesList</processor><port>split</port></source></datalink><datalink><sink type="processor"><processor>ShapeAnimals</processor><port>string3</port></sink><source type="processor"><processor>AnimalsList</processor><port>split</port></source></datalink><datalink><sink type="dataflow"><port>Output</port></sink><source type="processor"><processor>ShapeAnimals</processor><port>output</port></source></datalink></datalinks><annotations><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.DescriptiveTitle"> | |
| <text>Demonstration of configurable iteration</text> | |
| </annotationBean> | |
| <date>2009-06-29 15:44:05.675 BST</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
| <identification>8b6bb6f1-a567-4c65-89e4-ed400e487b9f</identification> | |
| </annotationBean> | |
| <date>2011-02-10 16:49:07.245 GMT</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
| <identification>87aa4917-46ce-473e-b183-f7d4e1860d30</identification> | |
| </annotationBean> | |
| <date>2011-02-10 17:06:01.482 GMT</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
| <identification>be152f54-e4a7-4324-9ce6-44438c5daed7</identification> | |
| </annotationBean> | |
| <date>2010-07-04 18:12:25.361 BST</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.Author"> | |
| <text>Tom Oinn</text> | |
| </annotationBean> | |
| <date>2009-06-29 15:44:05.675 BST</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain><annotation_chain encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.FreeTextDescription"> | |
| <text>This workflow shows the use of the iteration strategy editor to ensure that only relevant combinations of inputs are used during an implicit iteration.</text> | |
| </annotationBean> | |
| <date>2009-06-29 15:44:05.675 BST</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
| <annotationAssertions> | |
| <net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| <annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
| <identification>4bdec587-5bd1-4923-aef2-6acbe660e8f4</identification> | |
| </annotationBean> | |
| <date>2011-02-10 16:47:56.751 GMT</date> | |
| <creators /> | |
| <curationEventList /> | |
| </net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
| </annotationAssertions> | |
| </net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow> |