| #!/usr/bin/python |
| |
| # ***************************************************************************** |
| # |
| # Licensed to the Apache Software Foundation (ASF) under one |
| # or more contributor license agreements. See the NOTICE file |
| # distributed with this work for additional information |
| # regarding copyright ownership. The ASF licenses this file |
| # to you under the Apache License, Version 2.0 (the |
| # "License"); you may not use this file except in compliance |
| # with the License. You may obtain a copy of the License at |
| # |
| # http://www.apache.org/licenses/LICENSE-2.0 |
| # |
| # Unless required by applicable law or agreed to in writing, |
| # software distributed under the License is distributed on an |
| # "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY |
| # KIND, either express or implied. See the License for the |
| # specific language governing permissions and limitations |
| # under the License. |
| # |
| # ****************************************************************************** |
| |
| import boto3 |
| from botocore.client import Config |
| from fabric.api import * |
| import argparse |
| import os |
| import sys |
| import time |
| from fabric.api import lcd |
| from fabric.contrib.files import exists |
| from fabvenv import virtualenv |
| from dlab.notebook_lib import * |
| from dlab.actions_lib import * |
| from dlab.fab import * |
| from dlab.common_lib import * |
| |
| parser = argparse.ArgumentParser() |
| parser.add_argument('--bucket', type=str, default='') |
| parser.add_argument('--cluster_name', type=str, default='') |
| parser.add_argument('--dry_run', type=str, default='false') |
| parser.add_argument('--emr_version', type=str, default='') |
| parser.add_argument('--spark_version', type=str, default='') |
| parser.add_argument('--hadoop_version', type=str, default='') |
| parser.add_argument('--region', type=str, default='') |
| parser.add_argument('--excluded_lines', type=str, default='') |
| parser.add_argument('--user_name', type=str, default='') |
| parser.add_argument('--os_user', type=str, default='') |
| parser.add_argument('--pip_mirror', type=str, default='') |
| parser.add_argument('--numpy_version', type=str, default='') |
| parser.add_argument('--application', type=str, default='') |
| parser.add_argument('--r_enabled', type=str, default='') |
| args = parser.parse_args() |
| |
| emr_dir = '/opt/' + args.emr_version + '/jars/' |
| kernels_dir = '/home/' + args.os_user + '/.local/share/jupyter/kernels/' |
| spark_dir = '/opt/' + args.emr_version + '/' + args.cluster_name + '/spark/' |
| yarn_dir = '/opt/' + args.emr_version + '/' + args.cluster_name + '/conf/' |
| |
| |
| def r_kernel(args): |
| spark_path = '/opt/{}/{}/spark/'.format(args.emr_version, args.cluster_name) |
| local('mkdir -p {}/r_{}/'.format(kernels_dir, args.cluster_name)) |
| kernel_path = "{}/r_{}/kernel.json".format(kernels_dir, args.cluster_name) |
| template_file = "/tmp/r_dataengine-service_template.json" |
| r_version = local("R --version | awk '/version / {print $3}'", capture = True) |
| |
| with open(template_file, 'r') as f: |
| text = f.read() |
| text = text.replace('CLUSTER_NAME', args.cluster_name) |
| text = text.replace('SPARK_PATH', spark_path) |
| text = text.replace('SPARK_VERSION', 'Spark-' + args.spark_version) |
| text = text.replace('R_KERNEL_VERSION', 'R-{}'.format(str(r_version))) |
| text = text.replace('DATAENGINE-SERVICE_VERSION', args.emr_version) |
| if 'emr-4.' in args.emr_version: |
| text = text.replace('YARN_CLI_TYPE', 'yarn-client') |
| text = text.replace('SPARK_ACTION', 'init()') |
| else: |
| text = text.replace('YARN_CLI_TYPE', 'yarn') |
| text = text.replace('SPARK_ACTION', 'session(master = \\\"yarn\\\")') |
| with open(kernel_path, 'w') as f: |
| f.write(text) |
| |
| |
| def toree_kernel(args): |
| spark_path = '/opt/' + args.emr_version + '/' + args.cluster_name + '/spark/' |
| scala_version = local('scala -e "println(scala.util.Properties.versionNumberString)"', capture=True) |
| if args.emr_version == 'emr-4.3.0' or args.emr_version == 'emr-4.6.0' or args.emr_version == 'emr-4.8.0': |
| local('mkdir -p ' + kernels_dir + 'toree_' + args.cluster_name + '/') |
| kernel_path = kernels_dir + "toree_" + args.cluster_name + "/kernel.json" |
| template_file = "/tmp/toree_dataengine-service_template.json" |
| with open(template_file, 'r') as f: |
| text = f.read() |
| text = text.replace('CLUSTER_NAME', args.cluster_name) |
| text = text.replace('SPARK_VERSION', 'Spark-' + args.spark_version) |
| text = text.replace('SPARK_PATH', spark_path) |
| text = text.replace('DATAENGINE-SERVICE_VERSION', args.emr_version) |
| text = text.replace('SCALA_VERSION', scala_version) |
| with open(kernel_path, 'w') as f: |
| f.write(text) |
| local('touch /tmp/kernel_var.json') |
| local( |
| "PYJ=`find /opt/" + args.emr_version + "/" + args.cluster_name + "/spark/ -name '*py4j*.zip' | tr '\\n' ':' | sed 's|:$||g'`; cat " + kernel_path + " | sed 's|PY4J|'$PYJ'|g' > /tmp/kernel_var.json") |
| local('sudo mv /tmp/kernel_var.json ' + kernel_path) |
| else: |
| local('mkdir -p ' + kernels_dir + 'toree_' + args.cluster_name + '/') |
| local('tar zxvf /tmp/toree_kernel.tar.gz -C ' + kernels_dir + 'toree_' + args.cluster_name + '/') |
| kernel_path = kernels_dir + "toree_" + args.cluster_name + "/kernel.json" |
| template_file = "/tmp/toree_dataengine-service_templatev2.json" |
| with open(template_file, 'r') as f: |
| text = f.read() |
| text = text.replace('CLUSTER_NAME', args.cluster_name) |
| text = text.replace('SPARK_VERSION', 'Spark-' + args.spark_version) |
| text = text.replace('SPARK_PATH', spark_path) |
| text = text.replace('OS_USER', args.os_user) |
| text = text.replace('DATAENGINE-SERVICE_VERSION', args.emr_version) |
| text = text.replace('SCALA_VERSION', scala_version) |
| with open(kernel_path, 'w') as f: |
| f.write(text) |
| local('touch /tmp/kernel_var.json') |
| local( |
| "PYJ=`find /opt/" + args.emr_version + "/" + args.cluster_name + |
| "/spark/ -name '*py4j*.zip' | tr '\\n' ':' | sed 's|:$||g'`; cat " + kernel_path + |
| " | sed 's|PY4J|'$PYJ'|g' > /tmp/kernel_var.json") |
| local('sudo mv /tmp/kernel_var.json ' + kernel_path) |
| run_sh_path = kernels_dir + "toree_" + args.cluster_name + "/bin/run.sh" |
| template_sh_file = '/tmp/run_template.sh' |
| with open(template_sh_file, 'r') as f: |
| text = f.read() |
| text = text.replace('CLUSTER_NAME', args.cluster_name) |
| text = text.replace('OS_USER', args.os_user) |
| with open(run_sh_path, 'w') as f: |
| f.write(text) |
| |
| |
| def add_breeze_library_emr(args): |
| spark_defaults_path = '/opt/' + args.emr_version + '/' + args.cluster_name + '/spark/conf/spark-defaults.conf' |
| new_jars_directory_path = '/opt/' + args.emr_version + '/jars/usr/other/' |
| breeze_tmp_dir = '/tmp/breeze_tmp_emr/' |
| local('sudo mkdir -p ' + new_jars_directory_path) |
| local('mkdir -p ' + breeze_tmp_dir) |
| local('wget http://central.maven.org/maven2/org/scalanlp/breeze_2.11/0.12/breeze_2.11-0.12.jar -O ' + |
| breeze_tmp_dir + 'breeze_2.11-0.12.jar') |
| local('wget http://central.maven.org/maven2/org/scalanlp/breeze-natives_2.11/0.12/breeze-natives_2.11-0.12.jar -O ' |
| + breeze_tmp_dir + 'breeze-natives_2.11-0.12.jar') |
| local('wget http://central.maven.org/maven2/org/scalanlp/breeze-viz_2.11/0.12/breeze-viz_2.11-0.12.jar -O ' + |
| breeze_tmp_dir + 'breeze-viz_2.11-0.12.jar') |
| local('wget http://central.maven.org/maven2/org/scalanlp/breeze-macros_2.11/0.12/breeze-macros_2.11-0.12.jar -O ' + |
| breeze_tmp_dir + 'breeze-macros_2.11-0.12.jar') |
| local('wget http://central.maven.org/maven2/org/scalanlp/breeze-parent_2.11/0.12/breeze-parent_2.11-0.12.jar -O ' + |
| breeze_tmp_dir + 'breeze-parent_2.11-0.12.jar') |
| local('wget http://central.maven.org/maven2/org/jfree/jfreechart/1.0.19/jfreechart-1.0.19.jar -O ' + |
| breeze_tmp_dir + 'jfreechart-1.0.19.jar') |
| local('wget http://central.maven.org/maven2/org/jfree/jcommon/1.0.24/jcommon-1.0.24.jar -O ' + |
| breeze_tmp_dir + 'jcommon-1.0.24.jar') |
| local('wget --no-check-certificate https://brunelvis.org/jar/spark-kernel-brunel-all-2.3.jar -O ' + |
| breeze_tmp_dir + 'spark-kernel-brunel-all-2.3.jar') |
| local('sudo mv ' + breeze_tmp_dir + '* ' + new_jars_directory_path) |
| local(""" sudo bash -c "sed -i '/spark.driver.extraClassPath/s/$/:\/opt\/""" + args.emr_version + |
| """\/jars\/usr\/other\/*/' """ + spark_defaults_path + """" """) |
| |
| |
| if __name__ == "__main__": |
| if args.dry_run == 'true': |
| parser.print_help() |
| else: |
| result = prepare(emr_dir, yarn_dir) |
| if result == False : |
| jars(args, emr_dir) |
| yarn(args, yarn_dir) |
| install_emr_spark(args) |
| pyspark_kernel(kernels_dir, args.emr_version, args.cluster_name, args.spark_version, args.bucket, |
| args.user_name, args.region, args.os_user, args.application, args.pip_mirror, args.numpy_version) |
| toree_kernel(args) |
| if args.r_enabled == 'true': |
| r_kernel(args) |
| spark_defaults(args) |
| configuring_notebook(args.emr_version) |
| add_breeze_library_emr(args) |
