CRUNCH-227: Added tests to prove that ToolRunner does not affect writing output to Text or Sequence File
diff --git a/crunch-core/pom.xml b/crunch-core/pom.xml
index f321c1c..f97b105 100644
--- a/crunch-core/pom.xml
+++ b/crunch-core/pom.xml
@@ -172,6 +172,11 @@
       <artifactId>hamcrest-all</artifactId>
       <scope>test</scope>
     </dependency>
+    <dependency>
+      <groupId>commons-cli</groupId>
+      <artifactId>commons-cli</artifactId>
+      <scope>test</scope>
+    </dependency>
 
   </dependencies>
 
diff --git a/crunch-core/src/it/java/org/apache/crunch/io/ToolRunnerIT.java b/crunch-core/src/it/java/org/apache/crunch/io/ToolRunnerIT.java
new file mode 100644
index 0000000..287ba93
--- /dev/null
+++ b/crunch-core/src/it/java/org/apache/crunch/io/ToolRunnerIT.java
@@ -0,0 +1,212 @@
+/**
+ * Licensed to the Apache Software Foundation (ASF) under one
+ * or more contributor license agreements.  See the NOTICE file
+ * distributed with this work for additional information
+ * regarding copyright ownership.  The ASF licenses this file
+ * to you under the Apache License, Version 2.0 (the
+ * "License"); you may not use this file except in compliance
+ * with the License.  You may obtain a copy of the License at
+ *
+ *     http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+package org.apache.crunch.io;
+
+import org.apache.crunch.MapFn;
+import org.apache.crunch.PCollection;
+import org.apache.crunch.Pair;
+import org.apache.crunch.Pipeline;
+import org.apache.crunch.impl.mr.MRPipeline;
+import org.apache.crunch.io.seq.SeqFileTarget;
+import org.apache.crunch.io.text.TextFileTableSource;
+import org.apache.crunch.io.text.TextFileTarget;
+import org.apache.crunch.test.TemporaryPath;
+import org.apache.crunch.test.TemporaryPaths;
+import org.apache.crunch.types.PType;
+import org.apache.crunch.types.writable.Writables;
+import org.apache.hadoop.conf.Configurable;
+import org.apache.hadoop.conf.Configuration;
+import org.apache.hadoop.fs.FileStatus;
+import org.apache.hadoop.fs.FileSystem;
+import org.apache.hadoop.fs.Path;
+import org.apache.hadoop.io.BytesWritable;
+import org.apache.hadoop.util.Tool;
+import org.apache.hadoop.util.ToolRunner;
+import org.junit.Rule;
+import org.junit.Test;
+import org.junit.rules.TestName;
+
+
+import static org.apache.crunch.types.writable.Writables.strings;
+import static org.apache.crunch.types.writable.Writables.tableOf;
+import static org.hamcrest.Matchers.greaterThan;
+import static org.hamcrest.core.Is.is;
+import static org.junit.Assert.assertThat;
+import static org.junit.Assert.assertTrue;
+
+public class ToolRunnerIT {
+
+  @Rule
+  public TemporaryPath tmpDir = TemporaryPaths.create();
+
+  @Rule
+  public TestName testName = new TestName();
+
+  @Test
+  public void textRunWithToolRunner() throws Exception {
+    Configuration config = tmpDir.getDefaultConfiguration();
+
+    String output = tmpDir.getFileName(testName.getMethodName());
+
+    assertThat(ToolRunner.run(config, new FakeTextTool(), new String[]{tmpDir.copyResourceFileName("urls.txt"), output}), is(0));
+
+    FileSystem fs = FileSystem.get(config);
+
+    FileStatus fileStatus = fs.getFileStatus(new Path(output));
+
+    assertTrue(fileStatus.isDir());
+
+  }
+
+  @Test
+  public void textRunWithoutToolRunner() throws Exception {
+    Configuration config = tmpDir.getDefaultConfiguration();
+
+    String output = tmpDir.getFileName(testName.getMethodName());
+
+    FakeTextTool tool = new FakeTextTool();
+    tool.setConf(config);
+
+    assertThat(tool.run(new String[]{tmpDir.copyResourceFileName("urls.txt"), output}), is(0));
+
+    FileSystem fs = FileSystem.get(config);
+
+    FileStatus fileStatus = fs.getFileStatus(new Path(output));
+
+    assertTrue(fileStatus.isDir());
+  }
+
+  @Test
+  public void sequenceRunWithToolRunner() throws Exception {
+    Configuration config = tmpDir.getDefaultConfiguration();
+
+    String output = tmpDir.getFileName(testName.getMethodName());
+
+    assertThat(ToolRunner.run(config, new FakeSequenceTool(), new String[]{tmpDir.copyResourceFileName("urls.txt"), output}), is(0));
+
+    FileSystem fs = FileSystem.get(config);
+
+    FileStatus fileStatus = fs.getFileStatus(new Path(output));
+
+    assertTrue(fileStatus.isDir());
+
+  }
+
+
+  @Test
+  public void sequenceRunWithoutToolRunner() throws Exception {
+    Configuration config = tmpDir.getDefaultConfiguration();
+
+    String output = tmpDir.getFileName(testName.getMethodName());
+
+    FakeSequenceTool tool = new FakeSequenceTool();
+    tool.setConf(config);
+
+    assertThat(tool.run(new String[]{tmpDir.copyResourceFileName("urls.txt"), output}), is(0));
+
+    FileSystem fs = FileSystem.get(config);
+
+    FileStatus fileStatus = fs.getFileStatus(new Path(output));
+
+    assertTrue(fileStatus.isDir());
+  }
+
+
+  private static class FakeTextTool implements Tool, Configurable {
+
+    private Configuration config;
+
+    @Override
+    public int run(String[] strings) throws Exception {
+      String urlsFile = strings[0];
+      String outFile = strings[1];
+      Pipeline pipeline = new MRPipeline(ToolRunnerIT.class, getConf());
+
+      PCollection<String> urls = pipeline.read(
+          new TextFileTableSource<String, String>(urlsFile, tableOf(strings(), strings()))).values();
+
+      pipeline.write(urls, new TextFileTarget(outFile));
+
+      pipeline.done();
+
+      PCollection<String> stringPCollection = pipeline.readTextFile(outFile);
+
+      assertThat(stringPCollection.length().getValue(), is(greaterThan(0L)));
+
+      return 0;
+    }
+
+    @Override
+    public void setConf(Configuration entries) {
+      config = entries;
+    }
+
+    @Override
+    public Configuration getConf() {
+      return config;
+    }
+  }
+
+  private static class FakeSequenceTool implements Tool, Configurable {
+
+    private Configuration config;
+
+    @Override
+    public int run(String[] strings) throws Exception {
+      String urlsFile = strings[0];
+      String outFile = strings[1];
+      Pipeline pipeline = new MRPipeline(ToolRunnerIT.class, getConf());
+
+      PCollection<String> urls = pipeline.read(
+          new TextFileTableSource<String, String>(urlsFile, tableOf(strings(), strings()))).values();
+
+      PType<BytesWritable> bwType = Writables.writables(BytesWritable.class);
+      urls.parallelDo(new ByteConvertFn(), Writables.pairs(bwType, bwType));
+
+      pipeline.write(urls, new SeqFileTarget(outFile));
+
+      pipeline.done();
+
+      PCollection<Pair<BytesWritable, BytesWritable>> stringPCollection =
+          pipeline.read(From.sequenceFile(outFile, BytesWritable.class, BytesWritable.class));
+
+      assertThat(stringPCollection.length().getValue(), is(greaterThan(0L)));
+
+      return 0;
+    }
+
+    @Override
+    public void setConf(Configuration entries) {
+      config = entries;
+    }
+
+    @Override
+    public Configuration getConf() {
+      return config;
+    }
+  }
+
+  public static class ByteConvertFn extends MapFn<String, Pair<BytesWritable, BytesWritable>> {
+
+    @Override
+    public Pair<BytesWritable, BytesWritable> map(String input) {
+      BytesWritable bw = new BytesWritable(input.getBytes());
+      return Pair.of(bw, bw);
+    }
+  }
+}