ci/scripts/r_docker_configure.sh

#!/usr/bin/env bash
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# regarding copyright ownership.  The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
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# with the License.  You may obtain a copy of the License at
#
#   http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing,
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# specific language governing permissions and limitations
# under the License.

set -ex

: ${R_BIN:=R}

# The Dockerfile should have put this file here
if [ -f "/arrow/ci/etc/rprofile" ]; then
  # Ensure parallel R package installation, set CRAN repo mirror,
  # and use pre-built binaries where possible
  cat /arrow/ci/etc/rprofile >> $(${R_BIN} RHOME)/etc/Rprofile.site
fi

# Ensure parallel compilation of C/C++ code
echo "MAKEFLAGS=-j$(${R_BIN} -s -e 'cat(parallel::detectCores())')" >> $(${R_BIN} RHOME)/etc/Makeconf

# Special hacking to try to reproduce quirks on fedora-clang-devel on CRAN
# which uses a bespoke clang compiled to use libc++
# https://www.stats.ox.ac.uk/pub/bdr/Rconfig/r-devel-linux-x86_64-fedora-clang
if [ "$RHUB_PLATFORM" = "linux-x86_64-fedora-clang" ]; then
  dnf install -y libcxx-devel
  sed -i.bak -E -e 's/(CXX1?1? =.*)/\1 -stdlib=libc++/g' $(${R_BIN} RHOME)/etc/Makeconf
  rm -rf $(${R_BIN} RHOME)/etc/Makeconf.bak
fi

# Special hacking to try to reproduce quirks on centos using non-default build
# tooling.
if [[ "$DEVTOOLSET_VERSION" -gt 0 ]]; then
  if [ "`which dnf`" ]; then
    dnf install -y centos-release-scl
    dnf install -y "devtoolset-$DEVTOOLSET_VERSION"
  else
    yum install -y centos-release-scl
    yum install -y "devtoolset-$DEVTOOLSET_VERSION"
  fi
fi

# Install openssl for S3 support
if [ "$ARROW_S3" == "ON" ] || [ "$ARROW_R_DEV" == "TRUE" ]; then
  if [ "`which dnf`" ]; then
    dnf install -y libcurl-devel openssl-devel
  elif [ "`which yum`" ]; then
    yum install -y libcurl-devel openssl-devel
  elif [ "`which zypper`" ]; then
    zypper install -y libcurl-devel libopenssl-devel
  else
    apt-get update
    apt-get install -y libcurl4-openssl-dev libssl-dev
  fi

  # The Dockerfile should have put this file here
  if [ -f "/arrow/ci/scripts/install_minio.sh" ] && [ "`which wget`" ]; then
    /arrow/ci/scripts/install_minio.sh amd64 linux latest /usr/local
  fi
fi

# Workaround for html help install failure; see https://github.com/r-lib/devtools/issues/2084#issuecomment-530912786
Rscript -e 'x <- file.path(R.home("doc"), "html"); if (!file.exists(x)) {dir.create(x, recursive=TRUE); file.copy(system.file("html/R.css", package="stats"), x)}'

if [ "`which curl`" ]; then
  # We need this on R >= 4.0
  curl -L https://sourceforge.net/projects/checkbaskisms/files/2.0.0.2/checkbashisms/download > /usr/local/bin/checkbashisms
  chmod 755 /usr/local/bin/checkbashisms
fi