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.. Licensed to the Apache Software Foundation (ASF) under one
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.. regarding copyright ownership. The ASF licenses this file
.. to you under the Apache License, Version 2.0 (the
.. "License"); you may not use this file except in compliance
.. with the License. You may obtain a copy of the License at
.. http://www.apache.org/licenses/LICENSE-2.0
.. Unless required by applicable law or agreed to in writing,
.. software distributed under the License is distributed on an
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.. KIND, either express or implied. See the License for the
.. specific language governing permissions and limitations
.. under the License.
.. currentmodule:: pyarrow
.. cpp:namespace:: arrow
.. _extending:
Using pyarrow from C++ and Cython Code
======================================
pyarrow provides both a Cython and C++ API, allowing your own native code
to interact with pyarrow objects.
C++ API
-------
.. default-domain:: cpp
The Arrow C++ and PyArrow C++ header files are bundled with a pyarrow installation.
To get the absolute path to this directory (like ``numpy.get_include()``), use:
.. code-block:: python
import pyarrow as pa
pa.get_include()
Assuming the path above is on your compiler's include path, the pyarrow API
can be included using the following directive:
.. code-block:: cpp
#include <arrow/python/pyarrow.h>
This will not include other parts of the Arrow API, which you will need
to include yourself (for example ``arrow/api.h``).
When building C extensions that use the Arrow C++ libraries, you must add
appropriate linker flags. We have provided functions ``pa.get_libraries``
and ``pa.get_library_dirs`` which return a list of library names and
likely library install locations (if you installed pyarrow with pip or
conda). These must be included when declaring your C extensions with
setuptools (see below).
.. note::
The PyArrow-specific C++ code is now a part of the PyArrow source tree
and not Arrow C++. That means the header files and ``arrow_python`` library
are not necessarily installed in the same location as that of Arrow C++ and
will no longer be automatically findable by CMake.
Initializing the API
~~~~~~~~~~~~~~~~~~~~
.. function:: int import_pyarrow()
Initialize inner pointers of the pyarrow API. On success, 0 is
returned. Otherwise, -1 is returned and a Python exception is set.
It is mandatory to call this function before calling any other function
in the pyarrow C++ API. Failing to do so will likely lead to crashes.
Wrapping and Unwrapping
~~~~~~~~~~~~~~~~~~~~~~~
pyarrow provides the following functions to go back and forth between
Python wrappers (as exposed by the pyarrow Python API) and the underlying
C++ objects.
.. function:: bool arrow::py::is_array(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Array` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Array` instance.
.. function:: bool arrow::py::is_batch(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`RecordBatch` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.RecordBatch` instance.
.. function:: bool arrow::py::is_buffer(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Buffer` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Buffer` instance.
.. function:: bool arrow::py::is_data_type(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`DataType` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.DataType` instance.
.. function:: bool arrow::py::is_field(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Field` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Field` instance.
.. function:: bool arrow::py::is_scalar(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Scalar` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Scalar` instance.
.. function:: bool arrow::py::is_schema(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Schema` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Schema` instance.
.. function:: bool arrow::py::is_table(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Table` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Table` instance.
.. function:: bool arrow::py::is_tensor(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :class:`Tensor` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.Tensor` instance.
.. function:: bool arrow::py::is_sparse_coo_tensor(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :type:`SparseCOOTensor` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.SparseCOOTensor` instance.
.. function:: bool arrow::py::is_sparse_csc_matrix(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :type:`SparseCSCMatrix` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.SparseCSCMatrix` instance.
.. function:: bool arrow::py::is_sparse_csf_tensor(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :type:`SparseCSFTensor` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.SparseCSFTensor` instance.
.. function:: bool arrow::py::is_sparse_csr_matrix(PyObject* obj)
Return whether *obj* wraps an Arrow C++ :type:`SparseCSRMatrix` pointer;
in other words, whether *obj* is a :py:class:`pyarrow.SparseCSRMatrix` instance.
The following functions expect a pyarrow object, unwrap the underlying
Arrow C++ API pointer, and return it as a :class:`Result` object. An error
may be returned if the input object doesn't have the expected type.
.. function:: Result<std::shared_ptr<Array>> arrow::py::unwrap_array(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Array` pointer from *obj*.
.. function:: Result<std::shared_ptr<RecordBatch>> arrow::py::unwrap_batch(PyObject* obj)
Unwrap and return the Arrow C++ :class:`RecordBatch` pointer from *obj*.
.. function:: Result<std::shared_ptr<Buffer>> arrow::py::unwrap_buffer(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Buffer` pointer from *obj*.
.. function:: Result<std::shared_ptr<DataType>> arrow::py::unwrap_data_type(PyObject* obj)
Unwrap and return the Arrow C++ :class:`DataType` pointer from *obj*.
.. function:: Result<std::shared_ptr<Field>> arrow::py::unwrap_field(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Field` pointer from *obj*.
.. function:: Result<std::shared_ptr<Scalar>> arrow::py::unwrap_scalar(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Scalar` pointer from *obj*.
.. function:: Result<std::shared_ptr<Schema>> arrow::py::unwrap_schema(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Schema` pointer from *obj*.
.. function:: Result<std::shared_ptr<Table>> arrow::py::unwrap_table(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Table` pointer from *obj*.
.. function:: Result<std::shared_ptr<Tensor>> arrow::py::unwrap_tensor(PyObject* obj)
Unwrap and return the Arrow C++ :class:`Tensor` pointer from *obj*.
.. function:: Result<std::shared_ptr<SparseCOOTensor>> arrow::py::unwrap_sparse_coo_tensor(PyObject* obj)
Unwrap and return the Arrow C++ :type:`SparseCOOTensor` pointer from *obj*.
.. function:: Result<std::shared_ptr<SparseCSCMatrix>> arrow::py::unwrap_sparse_csc_matrix(PyObject* obj)
Unwrap and return the Arrow C++ :type:`SparseCSCMatrix` pointer from *obj*.
.. function:: Result<std::shared_ptr<SparseCSFTensor>> arrow::py::unwrap_sparse_csf_tensor(PyObject* obj)
Unwrap and return the Arrow C++ :type:`SparseCSFTensor` pointer from *obj*.
.. function:: Result<std::shared_ptr<SparseCSRMatrix>> arrow::py::unwrap_sparse_csr_matrix(PyObject* obj)
Unwrap and return the Arrow C++ :type:`SparseCSRMatrix` pointer from *obj*.
The following functions take an Arrow C++ API pointer and wrap it in a
pyarray object of the corresponding type. A new reference is returned.
On error, NULL is returned and a Python exception is set.
.. function:: PyObject* arrow::py::wrap_array(const std::shared_ptr<Array>& array)
Wrap the Arrow C++ *array* in a :py:class:`pyarrow.Array` instance.
.. function:: PyObject* arrow::py::wrap_batch(const std::shared_ptr<RecordBatch>& batch)
Wrap the Arrow C++ record *batch* in a :py:class:`pyarrow.RecordBatch` instance.
.. function:: PyObject* arrow::py::wrap_buffer(const std::shared_ptr<Buffer>& buffer)
Wrap the Arrow C++ *buffer* in a :py:class:`pyarrow.Buffer` instance.
.. function:: PyObject* arrow::py::wrap_data_type(const std::shared_ptr<DataType>& data_type)
Wrap the Arrow C++ *data_type* in a :py:class:`pyarrow.DataType` instance.
.. function:: PyObject* arrow::py::wrap_field(const std::shared_ptr<Field>& field)
Wrap the Arrow C++ *field* in a :py:class:`pyarrow.Field` instance.
.. function:: PyObject* arrow::py::wrap_scalar(const std::shared_ptr<Scalar>& scalar)
Wrap the Arrow C++ *scalar* in a :py:class:`pyarrow.Scalar` instance.
.. function:: PyObject* arrow::py::wrap_schema(const std::shared_ptr<Schema>& schema)
Wrap the Arrow C++ *schema* in a :py:class:`pyarrow.Schema` instance.
.. function:: PyObject* arrow::py::wrap_table(const std::shared_ptr<Table>& table)
Wrap the Arrow C++ *table* in a :py:class:`pyarrow.Table` instance.
.. function:: PyObject* arrow::py::wrap_tensor(const std::shared_ptr<Tensor>& tensor)
Wrap the Arrow C++ *tensor* in a :py:class:`pyarrow.Tensor` instance.
.. function:: PyObject* arrow::py::wrap_sparse_coo_tensor(const std::shared_ptr<SparseCOOTensor>& sparse_tensor)
Wrap the Arrow C++ *sparse_tensor* in a :py:class:`pyarrow.SparseCOOTensor` instance.
.. function:: PyObject* arrow::py::wrap_sparse_csc_matrix(const std::shared_ptr<SparseCSCMatrix>& sparse_tensor)
Wrap the Arrow C++ *sparse_tensor* in a :py:class:`pyarrow.SparseCSCMatrix` instance.
.. function:: PyObject* arrow::py::wrap_sparse_csf_tensor(const std::shared_ptr<SparseCSFTensor>& sparse_tensor)
Wrap the Arrow C++ *sparse_tensor* in a :py:class:`pyarrow.SparseCSFTensor` instance.
.. function:: PyObject* arrow::py::wrap_sparse_csr_matrix(const std::shared_ptr<SparseCSRMatrix>& sparse_tensor)
Wrap the Arrow C++ *sparse_tensor* in a :py:class:`pyarrow.SparseCSRMatrix` instance.
Cython API
----------
.. default-domain:: py
The Cython API more or less mirrors the C++ API, but the calling convention
can be different as required by Cython. In Cython, you don't need to
initialize the API as that will be handled automatically by the ``cimport``
directive.
.. note::
Classes from the Arrow C++ API are renamed when exposed in Cython, to
avoid named clashes with the corresponding Python classes. For example,
C++ Arrow arrays have the ``CArray`` type and ``Array`` is the
corresponding Python wrapper class.
Wrapping and Unwrapping
~~~~~~~~~~~~~~~~~~~~~~~
The following functions expect a pyarrow object, unwrap the underlying
Arrow C++ API pointer, and return it. NULL is returned (without setting
an exception) if the input is not of the right type.
.. function:: pyarrow_unwrap_array(obj) -> shared_ptr[CArray]
Unwrap the Arrow C++ :cpp:class:`Array` pointer from *obj*.
.. function:: pyarrow_unwrap_batch(obj) -> shared_ptr[CRecordBatch]
Unwrap the Arrow C++ :cpp:class:`RecordBatch` pointer from *obj*.
.. function:: pyarrow_unwrap_buffer(obj) -> shared_ptr[CBuffer]
Unwrap the Arrow C++ :cpp:class:`Buffer` pointer from *obj*.
.. function:: pyarrow_unwrap_data_type(obj) -> shared_ptr[CDataType]
Unwrap the Arrow C++ :cpp:class:`CDataType` pointer from *obj*.
.. function:: pyarrow_unwrap_field(obj) -> shared_ptr[CField]
Unwrap the Arrow C++ :cpp:class:`Field` pointer from *obj*.
.. function:: pyarrow_unwrap_scalar(obj) -> shared_ptr[CScalar]
Unwrap the Arrow C++ :cpp:class:`Scalar` pointer from *obj*.
.. function:: pyarrow_unwrap_schema(obj) -> shared_ptr[CSchema]
Unwrap the Arrow C++ :cpp:class:`Schema` pointer from *obj*.
.. function:: pyarrow_unwrap_table(obj) -> shared_ptr[CTable]
Unwrap the Arrow C++ :cpp:class:`Table` pointer from *obj*.
.. function:: pyarrow_unwrap_tensor(obj) -> shared_ptr[CTensor]
Unwrap the Arrow C++ :cpp:class:`Tensor` pointer from *obj*.
.. function:: pyarrow_unwrap_sparse_coo_tensor(obj) -> shared_ptr[CSparseCOOTensor]
Unwrap the Arrow C++ :cpp:type:`SparseCOOTensor` pointer from *obj*.
.. function:: pyarrow_unwrap_sparse_csc_matrix(obj) -> shared_ptr[CSparseCSCMatrix]
Unwrap the Arrow C++ :cpp:type:`SparseCSCMatrix` pointer from *obj*.
.. function:: pyarrow_unwrap_sparse_csf_tensor(obj) -> shared_ptr[CSparseCSFTensor]
Unwrap the Arrow C++ :cpp:type:`SparseCSFTensor` pointer from *obj*.
.. function:: pyarrow_unwrap_sparse_csr_matrix(obj) -> shared_ptr[CSparseCSRMatrix]
Unwrap the Arrow C++ :cpp:type:`SparseCSRMatrix` pointer from *obj*.
The following functions take a Arrow C++ API pointer and wrap it in a
pyarray object of the corresponding type. An exception is raised on error.
.. function:: pyarrow_wrap_array(const shared_ptr[CArray]& array) -> object
Wrap the Arrow C++ *array* in a Python :class:`pyarrow.Array` instance.
.. function:: pyarrow_wrap_batch(const shared_ptr[CRecordBatch]& batch) -> object
Wrap the Arrow C++ record *batch* in a Python :class:`pyarrow.RecordBatch` instance.
.. function:: pyarrow_wrap_buffer(const shared_ptr[CBuffer]& buffer) -> object
Wrap the Arrow C++ *buffer* in a Python :class:`pyarrow.Buffer` instance.
.. function:: pyarrow_wrap_data_type(const shared_ptr[CDataType]& data_type) -> object
Wrap the Arrow C++ *data_type* in a Python :class:`pyarrow.DataType` instance.
.. function:: pyarrow_wrap_field(const shared_ptr[CField]& field) -> object
Wrap the Arrow C++ *field* in a Python :class:`pyarrow.Field` instance.
.. function:: pyarrow_wrap_resizable_buffer(const shared_ptr[CResizableBuffer]& buffer) -> object
Wrap the Arrow C++ resizable *buffer* in a Python :class:`pyarrow.ResizableBuffer` instance.
.. function:: pyarrow_wrap_scalar(const shared_ptr[CScalar]& scalar) -> object
Wrap the Arrow C++ *scalar* in a Python :class:`pyarrow.Scalar` instance.
.. function:: pyarrow_wrap_schema(const shared_ptr[CSchema]& schema) -> object
Wrap the Arrow C++ *schema* in a Python :class:`pyarrow.Schema` instance.
.. function:: pyarrow_wrap_table(const shared_ptr[CTable]& table) -> object
Wrap the Arrow C++ *table* in a Python :class:`pyarrow.Table` instance.
.. function:: pyarrow_wrap_tensor(const shared_ptr[CTensor]& tensor) -> object
Wrap the Arrow C++ *tensor* in a Python :class:`pyarrow.Tensor` instance.
.. function:: pyarrow_wrap_sparse_coo_tensor(const shared_ptr[CSparseCOOTensor]& sparse_tensor) -> object
Wrap the Arrow C++ *COO sparse tensor* in a Python :class:`pyarrow.SparseCOOTensor` instance.
.. function:: pyarrow_wrap_sparse_csc_matrix(const shared_ptr[CSparseCSCMatrix]& sparse_tensor) -> object
Wrap the Arrow C++ *CSC sparse tensor* in a Python :class:`pyarrow.SparseCSCMatrix` instance.
.. function:: pyarrow_wrap_sparse_csf_tensor(const shared_ptr[CSparseCSFTensor]& sparse_tensor) -> object
Wrap the Arrow C++ *COO sparse tensor* in a Python :class:`pyarrow.SparseCSFTensor` instance.
.. function:: pyarrow_wrap_sparse_csr_matrix(const shared_ptr[CSparseCSRMatrix]& sparse_tensor) -> object
Wrap the Arrow C++ *CSR sparse tensor* in a Python :class:`pyarrow.SparseCSRMatrix` instance.
Example
~~~~~~~
The following Cython module shows how to unwrap a Python object and call
the underlying C++ object's API.
.. code-block:: python
# distutils: language=c++
from pyarrow.lib cimport *
def get_array_length(obj):
# Just an example function accessing both the pyarrow Cython API
# and the Arrow C++ API
cdef shared_ptr[CArray] arr = pyarrow_unwrap_array(obj)
if arr.get() == NULL:
raise TypeError("not an array")
return arr.get().length()
To build this module, you will need a slightly customized ``setup.py`` file
(this is assuming the file above is named ``example.pyx``):
.. code-block:: python
from setuptools import setup
from Cython.Build import cythonize
import os
import numpy as np
import pyarrow as pa
ext_modules = cythonize("example.pyx")
for ext in ext_modules:
# The Numpy C headers are currently required
ext.include_dirs.append(np.get_include())
ext.include_dirs.append(pa.get_include())
ext.libraries.extend(pa.get_libraries())
ext.library_dirs.extend(pa.get_library_dirs())
if os.name == 'posix':
ext.extra_compile_args.append('-std=c++20')
setup(ext_modules=ext_modules)
Compile the extension:
.. code-block:: bash
python setup.py build_ext --inplace
Building Extensions against PyPI Wheels
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
The Python wheels have the Arrow C++ libraries bundled in the top level
``pyarrow/`` install directory. On Linux and macOS, these libraries have an ABI
tag like ``libarrow.so.17`` which means that linking with ``-larrow`` using the
linker path provided by ``pyarrow.get_library_dirs()`` will not work right out
of the box. To fix this, you must run ``pyarrow.create_library_symlinks()``
once as a user with write access to the directory where pyarrow is
installed. This function will attempt to create symlinks like
``pyarrow/libarrow.so``. For example:
.. code-block:: bash
pip install pyarrow
python -c "import pyarrow; pyarrow.create_library_symlinks()"
Toolchain Compatibility (Linux)
"""""""""""""""""""""""""""""""
The Python wheels for Linux are built using the
`PyPA manylinux images <https://quay.io/organization/pypa>`_ which use
the AlmaLinux ``gcc-toolset-12``. In addition to the other notes
above, if you are compiling C++ using these shared libraries, you will need
to make sure you use a compatible toolchain as well or you might see a
segfault during runtime.