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| <h1>FileSystem classes</h1> |
| <small class="dont-index">Source: <a href="https://github.com/apache/arrow/blob/main/r/R/filesystem.R" class="external-link"><code>R/filesystem.R</code></a></small> |
| <div class="d-none name"><code>FileSystem.Rd</code></div> |
| </div> |
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| <div class="ref-description section level2"> |
| <p><code>FileSystem</code> is an abstract file system API, |
| <code>LocalFileSystem</code> is an implementation accessing files |
| on the local machine. <code>SubTreeFileSystem</code> is an implementation that delegates |
| to another implementation after prepending a fixed base path</p> |
| </div> |
| |
| |
| <div class="section level2"> |
| <h2 id="factory">Factory<a class="anchor" aria-label="anchor" href="#factory"></a></h2> |
| |
| |
| |
| <p><code>LocalFileSystem$create()</code> returns the object and takes no arguments.</p> |
| <p><code>SubTreeFileSystem$create()</code> takes the following arguments:</p><ul><li><p><code>base_path</code>, a string path</p></li> |
| <li><p><code>base_fs</code>, a <code>FileSystem</code> object</p></li> |
| </ul><p><code>S3FileSystem$create()</code> optionally takes arguments:</p><ul><li><p><code>anonymous</code>: logical, default <code>FALSE</code>. If true, will not attempt to look up |
| credentials using standard AWS configuration methods.</p></li> |
| <li><p><code>access_key</code>, <code>secret_key</code>: authentication credentials. If one is provided, |
| the other must be as well. If both are provided, they will override any |
| AWS configuration set at the environment level.</p></li> |
| <li><p><code>session_token</code>: optional string for authentication along with |
| <code>access_key</code> and <code>secret_key</code></p></li> |
| <li><p><code>role_arn</code>: string AWS ARN of an AccessRole. If provided instead of <code>access_key</code> and |
| <code>secret_key</code>, temporary credentials will be fetched by assuming this role.</p></li> |
| <li><p><code>session_name</code>: optional string identifier for the assumed role session.</p></li> |
| <li><p><code>external_id</code>: optional unique string identifier that might be required |
| when you assume a role in another account.</p></li> |
| <li><p><code>load_frequency</code>: integer, frequency (in seconds) with which temporary |
| credentials from an assumed role session will be refreshed. Default is |
| 900 (i.e. 15 minutes)</p></li> |
| <li><p><code>region</code>: AWS region to connect to. If omitted, the AWS library will |
| provide a sensible default based on client configuration, falling back |
| to "us-east-1" if no other alternatives are found.</p></li> |
| <li><p><code>endpoint_override</code>: If non-empty, override region with a connect string |
| such as "localhost:9000". This is useful for connecting to file systems |
| that emulate S3.</p></li> |
| <li><p><code>scheme</code>: S3 connection transport (default "https")</p></li> |
| <li><p><code>proxy_options</code>: optional string, URI of a proxy to use when connecting |
| to S3</p></li> |
| <li><p><code>background_writes</code>: logical, whether <code>OutputStream</code> writes will be issued |
| in the background, without blocking (default <code>TRUE</code>)</p></li> |
| <li><p><code>allow_bucket_creation</code>: logical, if TRUE, the filesystem will create |
| buckets if <code>$CreateDir()</code> is called on the bucket level (default <code>FALSE</code>).</p></li> |
| <li><p><code>allow_bucket_deletion</code>: logical, if TRUE, the filesystem will delete |
| buckets if<code>$DeleteDir()</code> is called on the bucket level (default <code>FALSE</code>).</p></li> |
| <li><p><code>check_directory_existence_before_creation</code>: logical, check if directory |
| already exists or not before creation. Helpful for cloud storage operations |
| where object mutation operations are rate limited or existing directories |
| are read-only. (default <code>FALSE</code>).</p></li> |
| <li><p><code>request_timeout</code>: Socket read time on Windows and macOS in seconds. If |
| negative, the AWS SDK default (typically 3 seconds).</p></li> |
| <li><p><code>connect_timeout</code>: Socket connection timeout in seconds. If negative, AWS |
| SDK default is used (typically 1 second).</p></li> |
| </ul><p><code>GcsFileSystem$create()</code> optionally takes arguments:</p><ul><li><p><code>anonymous</code>: logical, default <code>FALSE</code>. If true, will not attempt to look up |
| credentials using standard GCS configuration methods.</p></li> |
| <li><p><code>access_token</code>: optional string for authentication. Should be provided along |
| with <code>expiration</code></p></li> |
| <li><p><code>expiration</code>: <code>POSIXct</code>. optional datetime representing point at which |
| <code>access_token</code> will expire.</p></li> |
| <li><p><code>json_credentials</code>: optional string for authentication. Either a string |
| containing JSON credentials or a path to their location on the filesystem. |
| If a path to credentials is given, the file should be UTF-8 encoded.</p></li> |
| <li><p><code>endpoint_override</code>: if non-empty, will connect to provided host name / port, |
| such as "localhost:9001", instead of default GCS ones. This is primarily useful |
| for testing purposes.</p></li> |
| <li><p><code>scheme</code>: connection transport (default "https")</p></li> |
| <li><p><code>default_bucket_location</code>: the default location (or "region") to create new |
| buckets in.</p></li> |
| <li><p><code>retry_limit_seconds</code>: the maximum amount of time to spend retrying if |
| the filesystem encounters errors. Default is 15 seconds.</p></li> |
| <li><p><code>default_metadata</code>: default metadata to write in new objects.</p></li> |
| <li><p><code>project_id</code>: the project to use for creating buckets.</p></li> |
| </ul></div> |
| <div class="section level2"> |
| <h2 id="methods">Methods<a class="anchor" aria-label="anchor" href="#methods"></a></h2> |
| |
| |
| <ul><li><p><code>path(x)</code>: Create a <code>SubTreeFileSystem</code> from the current <code>FileSystem</code> |
| rooted at the specified path <code>x</code>.</p></li> |
| <li><p><code>cd(x)</code>: Create a <code>SubTreeFileSystem</code> from the current <code>FileSystem</code> |
| rooted at the specified path <code>x</code>.</p></li> |
| <li><p><code>ls(path, ...)</code>: List files or objects at the given path or from the root |
| of the <code>FileSystem</code> if <code>path</code> is not provided. Additional arguments passed |
| to <code>FileSelector$create</code>, see <a href="FileSelector.html">FileSelector</a>.</p></li> |
| <li><p><code>$GetFileInfo(x)</code>: <code>x</code> may be a <a href="FileSelector.html">FileSelector</a> or a character |
| vector of paths. Returns a list of <a href="FileInfo.html">FileInfo</a></p></li> |
| <li><p><code>$CreateDir(path, recursive = TRUE)</code>: Create a directory and subdirectories.</p></li> |
| <li><p><code>$DeleteDir(path)</code>: Delete a directory and its contents, recursively.</p></li> |
| <li><p><code>$DeleteDirContents(path)</code>: Delete a directory's contents, recursively. |
| Like <code>$DeleteDir()</code>, |
| but doesn't delete the directory itself. Passing an empty path (<code>""</code>) will |
| wipe the entire filesystem tree.</p></li> |
| <li><p><code>$DeleteFile(path)</code> : Delete a file.</p></li> |
| <li><p><code>$DeleteFiles(paths)</code> : Delete many files. The default implementation |
| issues individual delete operations in sequence.</p></li> |
| <li><p><code>$Move(src, dest)</code>: Move / rename a file or directory. If the destination |
| exists: |
| if it is a non-empty directory, an error is returned |
| otherwise, if it has the same type as the source, it is replaced |
| otherwise, behavior is unspecified (implementation-dependent).</p></li> |
| <li><p><code>$CopyFile(src, dest)</code>: Copy a file. If the destination exists and is a |
| directory, an error is returned. Otherwise, it is replaced.</p></li> |
| <li><p><code>$OpenInputStream(path)</code>: Open an <a href="InputStream.html">input stream</a> for |
| sequential reading.</p></li> |
| <li><p><code>$OpenInputFile(path)</code>: Open an <a href="InputStream.html">input file</a> for random |
| access reading.</p></li> |
| <li><p><code>$OpenOutputStream(path)</code>: Open an <a href="OutputStream.html">output stream</a> for |
| sequential writing.</p></li> |
| <li><p><code>$OpenAppendStream(path)</code>: Open an <a href="OutputStream.html">output stream</a> for |
| appending.</p></li> |
| </ul></div> |
| <div class="section level2"> |
| <h2 id="active-bindings">Active bindings<a class="anchor" aria-label="anchor" href="#active-bindings"></a></h2> |
| |
| |
| <ul><li><p><code>$type_name</code>: string filesystem type name, such as "local", "s3", etc.</p></li> |
| <li><p><code>$region</code>: string AWS region, for <code>S3FileSystem</code> and <code>SubTreeFileSystem</code> |
| containing a <code>S3FileSystem</code></p></li> |
| <li><p><code>$base_fs</code>: for <code>SubTreeFileSystem</code>, the <code>FileSystem</code> it contains</p></li> |
| <li><p><code>$base_path</code>: for <code>SubTreeFileSystem</code>, the path in <code>$base_fs</code> which is considered |
| root in this <code>SubTreeFileSystem</code>.</p></li> |
| <li><p><code>$options</code>: for <code>GcsFileSystem</code>, the options used to create the |
| <code>GcsFileSystem</code> instance as a <code>list</code></p></li> |
| </ul></div> |
| <div class="section level2"> |
| <h2 id="notes">Notes<a class="anchor" aria-label="anchor" href="#notes"></a></h2> |
| |
| |
| |
| <p>On S3FileSystem, <code>$CreateDir()</code> on a top-level directory creates a new bucket. |
| When S3FileSystem creates new buckets (assuming allow_bucket_creation is TRUE), |
| it does not pass any non-default settings. In AWS S3, the bucket and all |
| objects will be not publicly visible, and will have no bucket policies |
| and no resource tags. To have more control over how buckets are created, |
| use a different API to create them.</p> |
| <p>On S3FileSystem, output is only produced for fatal errors or when printing |
| return values. For troubleshooting, the log level can be set using the |
| environment variable <code>ARROW_S3_LOG_LEVEL</code> (e.g., |
| <code>Sys.setenv("ARROW_S3_LOG_LEVEL"="DEBUG")</code>). The log level must be set prior |
| to running any code that interacts with S3. Possible values include 'FATAL' |
| (the default), 'ERROR', 'WARN', 'INFO', 'DEBUG' (recommended), 'TRACE', and |
| 'OFF'.</p> |
| </div> |
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