| #!${shellName} |
| # LSF batch job submission script generated by Apache Airavata |
| |
| <% |
| if(shellName != null && shellName != "") out.print '#BSUB -L ' + shellName + '\n' |
| if (queueName != null && queueName != "") out.print '#BSUB -q ' + queueName + '\n' |
| if (nodes != null && nodes != "") out.print '#BSUB -n ' + nodes + '\n' |
| if (jobName != null && jobName != "") out.print '#BSUB -J ' + jobName + '\n' |
| if (mailAddress != null && mailAddress != "") out.print '#BSUB -u ' + mailAddress + '\n' |
| out.print '#BSUB -B\n' |
| out.print '#BSUB -N\n' |
| if (accountString != null && accountString != "") out.print '#BSUB -P ' + accountString + '\n' |
| if (maxWallTime != null && maxWallTime != "") out.print '#BSUB -W ' + maxWallTime + '\n' |
| if (standardOutFile != null && standardOutFile != "") out.print '#BSUB -o ' + standardOutFile + '\n' |
| if (standardErrorFile != null && standardErrorFile != "") out.print '#BSUB -e ' + standardErrorFile + '\n' |
| if (chassisName != null && chassisName != "") out.print '#BSUB -m c' + chassisName + '\n' |
| if (usedMem != null && usedMem != "") out.print '#BSUB -R rusage[mem=' + usedMem + ']\n' |
| %> |
| |
| <% if (exports != null) for(com in exports) out.print 'export ' + com +'\n' |
| if (moduleCommands != null) for(mc in moduleCommands) out.print mc +'\n' |
| if (workingDirectory != null && workingDirectory != "") out.print 'cd ' + workingDirectory +'\n' |
| if (preJobCommands != null) for(pjc in preJobCommands) out.print pjc +'\n' |
| if (jobSubmitterCommand != null && jobSubmitterCommand != "") out.print jobSubmitterCommand + ' ' |
| if (processPerNode != null && processPerNode != "") out.print processPerNode + ' ' |
| if (executablePath != null && executablePath != "") out.print executablePath + ' ' |
| if (inputs != null) for(input in inputs) out.print input + ' ' |
| out.print '\n' |
| if (postJobCommands != null) for(pjc in postJobCommands) out.print pjc +'\n' |
| %> |
