<workflow xmlns="http://taverna.sf.net/2008/xml/t2flow" version="1" producedBy="taverna-2.3.0"><dataflow id="9fb6e3ea-f314-4f9f-8eb3-ba3dbf2b494f" role="top"><name>Workflow1</name><inputPorts /><outputPorts><port><name>out</name><annotations /></port></outputPorts><processors><processor><name>XPath_Service</name><inputPorts><port><name>xml_text</name><depth>0</depth></port></inputPorts><outputPorts><port><name>nodelistAsXML</name><depth>1</depth><granularDepth>1</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>xpath-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.xpath.XPathActivity</class><inputMap><map from="xml_text" to="xml_text" /></inputMap><outputMap><map from="nodelistAsXML" to="nodelistAsXML" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.xpath.XPathActivityConfigurationBean xmlns=""> | |
<xmlDocument><?xml version="1.0" encoding="UTF-8"?> | |
<test name="test-name"> | |
<test-element>test</test-element> | |
</test></xmlDocument> | |
<xpathExpression>/test/test-element</xpathExpression> | |
<xpathNamespaceMap /> | |
</net.sf.taverna.t2.activities.xpath.XPathActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
<maxJobs>1</maxJobs> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
<backoffFactor>1.0</backoffFactor> | |
<initialDelay>1000</initialDelay> | |
<maxDelay>5000</maxDelay> | |
<maxRetries>0</maxRetries> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="xml_text" depth="0" /></cross></strategy></iteration></iterationStrategyStack></processor><processor><name>xml_text_value</name><inputPorts /><outputPorts><port><name>value</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>stringconstant-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.stringconstant.StringConstantActivity</class><inputMap /><outputMap><map from="value" to="value" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean xmlns=""> | |
<value><?xml version="1.0" encoding="UTF-8"?> <test name="test-name"> <test-element>test</test-element> </test></value> | |
</net.sf.taverna.t2.activities.stringconstant.StringConstantConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
<maxJobs>1</maxJobs> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
<backoffFactor>1.0</backoffFactor> | |
<initialDelay>1000</initialDelay> | |
<maxDelay>5000</maxDelay> | |
<maxRetries>0</maxRetries> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy /></iteration></iterationStrategyStack></processor><processor><name>Merge_String_List_to_a_String</name><inputPorts><port><name>stringlist</name><depth>1</depth></port></inputPorts><outputPorts><port><name>concatenated</name><depth>0</depth><granularDepth>0</granularDepth></port></outputPorts><annotations /><activities><activity><raven><group>net.sf.taverna.t2.activities</group><artifact>localworker-activity</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.activities.localworker.LocalworkerActivity</class><inputMap><map from="stringlist" to="stringlist" /></inputMap><outputMap><map from="concatenated" to="concatenated" /></outputMap><configBean encoding="xstream"><net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean xmlns=""> | |
<inputs> | |
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
<name>stringlist</name> | |
<depth>1</depth> | |
<mimeTypes> | |
<string>l('text/plain')</string> | |
</mimeTypes> | |
<handledReferenceSchemes /> | |
<translatedElementType>java.lang.String</translatedElementType> | |
<allowsLiteralValues>true</allowsLiteralValues> | |
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
<name>seperator</name> | |
<depth>0</depth> | |
<mimeTypes> | |
<string>'text/plain'</string> | |
</mimeTypes> | |
<handledReferenceSchemes /> | |
<translatedElementType>java.lang.String</translatedElementType> | |
<allowsLiteralValues>true</allowsLiteralValues> | |
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityInputPortDefinitionBean> | |
</inputs> | |
<outputs> | |
<net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
<name>concatenated</name> | |
<depth>0</depth> | |
<mimeTypes> | |
<string>'text/plain'</string> | |
</mimeTypes> | |
<granularDepth>0</granularDepth> | |
</net.sf.taverna.t2.workflowmodel.processor.activity.config.ActivityOutputPortDefinitionBean> | |
</outputs> | |
<classLoaderSharing>workflow</classLoaderSharing> | |
<localDependencies /> | |
<artifactDependencies /> | |
<script>String seperatorString = "\n"; | |
if (seperator != void) { | |
seperatorString = seperator; | |
} | |
StringBuffer sb = new StringBuffer(); | |
for (Iterator i = stringlist.iterator(); i.hasNext();) { | |
String item = (String) i.next(); | |
sb.append(item); | |
if (i.hasNext()) { | |
sb.append(seperatorString); | |
} | |
} | |
concatenated = sb.toString(); | |
</script> | |
<dependencies /> | |
<localworkerName>org.embl.ebi.escience.scuflworkers.java.StringListMerge</localworkerName> | |
</net.sf.taverna.t2.activities.localworker.LocalworkerActivityConfigurationBean></configBean><annotations /></activity></activities><dispatchStack><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Parallelize</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig xmlns=""> | |
<maxJobs>1</maxJobs> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ParallelizeConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.ErrorBounce</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Failover</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Retry</class><configBean encoding="xstream"><net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig xmlns=""> | |
<backoffFactor>1.0</backoffFactor> | |
<initialDelay>1000</initialDelay> | |
<maxDelay>5000</maxDelay> | |
<maxRetries>0</maxRetries> | |
</net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.RetryConfig></configBean></dispatchLayer><dispatchLayer><raven><group>net.sf.taverna.t2.core</group><artifact>workflowmodel-impl</artifact><version>1.3</version></raven><class>net.sf.taverna.t2.workflowmodel.processor.dispatch.layers.Invoke</class><configBean encoding="xstream"><null xmlns="" /></configBean></dispatchLayer></dispatchStack><iterationStrategyStack><iteration><strategy><cross><port name="stringlist" depth="1" /></cross></strategy></iteration></iterationStrategyStack></processor></processors><conditions /><datalinks><datalink><sink type="processor"><processor>XPath_Service</processor><port>xml_text</port></sink><source type="processor"><processor>xml_text_value</processor><port>value</port></source></datalink><datalink><sink type="processor"><processor>Merge_String_List_to_a_String</processor><port>stringlist</port></sink><source type="processor"><processor>XPath_Service</processor><port>nodelistAsXML</port></source></datalink><datalink><sink type="dataflow"><port>out</port></sink><source type="processor"><processor>Merge_String_List_to_a_String</processor><port>concatenated</port></source></datalink></datalinks><annotations><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
<annotationAssertions> | |
<net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
<annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
<identification>9fb6e3ea-f314-4f9f-8eb3-ba3dbf2b494f</identification> | |
</annotationBean> | |
<date>2011-11-03 14:17:32.152 GMT</date> | |
<creators /> | |
<curationEventList /> | |
</net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
</annotationAssertions> | |
</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
<annotationAssertions> | |
<net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
<annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
<identification>bed5342f-45e0-4fc9-a85d-bcd1ea01e33d</identification> | |
</annotationBean> | |
<date>2011-11-03 12:55:28.941 GMT</date> | |
<creators /> | |
<curationEventList /> | |
</net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
</annotationAssertions> | |
</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
<annotationAssertions> | |
<net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
<annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
<identification>9f0cedc9-4a53-4564-aeb5-d0b7f7b2b4e1</identification> | |
</annotationBean> | |
<date>2011-11-03 12:56:36.620 GMT</date> | |
<creators /> | |
<curationEventList /> | |
</net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
</annotationAssertions> | |
</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2><annotation_chain_2_2 encoding="xstream"><net.sf.taverna.t2.annotation.AnnotationChainImpl xmlns=""> | |
<annotationAssertions> | |
<net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
<annotationBean class="net.sf.taverna.t2.annotation.annotationbeans.IdentificationAssertion"> | |
<identification>94104add-ec12-4c5a-a4f6-b5c1b6d0a700</identification> | |
</annotationBean> | |
<date>2011-11-03 12:56:00.6 GMT</date> | |
<creators /> | |
<curationEventList /> | |
</net.sf.taverna.t2.annotation.AnnotationAssertionImpl> | |
</annotationAssertions> | |
</net.sf.taverna.t2.annotation.AnnotationChainImpl></annotation_chain_2_2></annotations></dataflow></workflow> |