diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..456c7e0
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,4 @@
+.project
+.settings
+.classpath
+target
diff --git a/.travis.yml b/.travis.yml
new file mode 100644
index 0000000..dff5f3a
--- /dev/null
+++ b/.travis.yml
@@ -0,0 +1 @@
+language: java
diff --git a/CITATION.txt b/CITATION.txt
new file mode 100644
index 0000000..ee89568
--- /dev/null
+++ b/CITATION.txt
@@ -0,0 +1,18 @@
+Wolstencroft, K., Haines, R., Fellows, D., Williams, A., Withers, D.,
+  Owen, S., Soiland-Reyes, S., Dunlop, I., Nenadic, A., Fisher, P., Bhagat, J.,
+  Belhajjame, K., Bacall, F., Hardisty, A., Nieva de la Hidalga, A.,
+  Balcazar Vargas, M.P., Sufi, S., and Goble, C.  2013.
+The Taverna workflow suite: designing and executing workflows of Web Services
+on the desktop, web or in the cloud.  Nucl. Acids Res. gkt328v1
+http://doi.org/doi:10.1093/nar/gkt328
+
+@article{Wolstencroft02052013,
+  author = {Wolstencroft, Katherine and Haines, Robert and Fellows, Donal and Williams, Alan and Withers, David and Owen, Stuart and Soiland-Reyes, Stian and Dunlop, Ian and Nenadic, Aleksandra and Fisher, Paul and Bhagat, Jiten and Belhajjame, Khalid and Bacall, Finn and Hardisty, Alex and Nieva de la Hidalga, Abraham and Balcazar Vargas, Maria P. and Sufi, Shoaib and Goble, Carole}, 
+  title = {The {Taverna} workflow suite: designing and executing workflows of {Web Services} on the desktop, web or in the cloud},
+  year = {2013}, 
+  doi = {10.1093/nar/gkt328}, 
+  abstract ={The Taverna workflow tool suite (http://www.taverna.org.uk) is designed to combine distributed Web Services and/or local tools into complex analysis pipelines. These pipelines can be executed on local desktop machines or through larger infrastructure (such as supercomputers, Grids or cloud environments), using the Taverna Server. In bioinformatics, Taverna workflows are typically used in the areas of high-throughput omics analyses (for example, proteomics or transcriptomics), or for evidence gathering methods involving text mining or data mining. Through Taverna, scientists have access to several thousand different tools and resources that are freely available from a large range of life science institutions. Once constructed, the workflows are reusable, executable bioinformatics protocols that can be shared, reused and repurposed. A repository of public workflows is available at http://www.myexperiment.org. This article provides an update to the Taverna tool suite, highlighting new features and developments in the workbench and the Taverna Server.}, 
+  URL = {http://nar.oxfordjournals.org/content/early/2013/05/02/nar.gkt328.abstract}, 
+  eprint = {http://nar.oxfordjournals.org/content/early/2013/05/02/nar.gkt328.full.pdf+html}, 
+  journal = {Nucleic Acids Research} 
+}
diff --git a/LICENSE b/LICENSE
new file mode 100644
index 0000000..68c771a
--- /dev/null
+++ b/LICENSE
@@ -0,0 +1,176 @@
+
+                                 Apache License
+                           Version 2.0, January 2004
+                        http://www.apache.org/licenses/
+
+   TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
+
+   1. Definitions.
+
+      "License" shall mean the terms and conditions for use, reproduction,
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+      "Licensor" shall mean the copyright owner or entity authorized by
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+      "Legal Entity" shall mean the union of the acting entity and all
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+      otherwise, or (ii) ownership of fifty percent (50%) or more of the
+      outstanding shares, or (iii) beneficial ownership of such entity.
+
+      "You" (or "Your") shall mean an individual or Legal Entity
+      exercising permissions granted by this License.
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+      "Work" shall mean the work of authorship, whether in Source or
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+      "Derivative Works" shall mean any work, whether in Source or Object
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+      You may add Your own copyright statement to Your modifications and
+      may provide additional or different license terms and conditions
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+
+   5. Submission of Contributions. Unless You explicitly state otherwise,
+      any Contribution intentionally submitted for inclusion in the Work
+      by You to the Licensor shall be under the terms and conditions of
+      this License, without any additional terms or conditions.
+      Notwithstanding the above, nothing herein shall supersede or modify
+      the terms of any separate license agreement you may have executed
+      with Licensor regarding such Contributions.
+
+   6. Trademarks. This License does not grant permission to use the trade
+      names, trademarks, service marks, or product names of the Licensor,
+      except as required for reasonable and customary use in describing the
+      origin of the Work and reproducing the content of the NOTICE file.
+
+   7. Disclaimer of Warranty. Unless required by applicable law or
+      agreed to in writing, Licensor provides the Work (and each
+      Contributor provides its Contributions) on an "AS IS" BASIS,
+      WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
+      implied, including, without limitation, any warranties or conditions
+      of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
+      PARTICULAR PURPOSE. You are solely responsible for determining the
+      appropriateness of using or redistributing the Work and assume any
+      risks associated with Your exercise of permissions under this License.
+
+   8. Limitation of Liability. In no event and under no legal theory,
+      whether in tort (including negligence), contract, or otherwise,
+      unless required by applicable law (such as deliberate and grossly
+      negligent acts) or agreed to in writing, shall any Contributor be
+      liable to You for damages, including any direct, indirect, special,
+      incidental, or consequential damages of any character arising as a
+      result of this License or out of the use or inability to use the
+      Work (including but not limited to damages for loss of goodwill,
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+   9. Accepting Warranty or Additional Liability. While redistributing
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+
diff --git a/README.md b/README.md
new file mode 100644
index 0000000..c754b25
--- /dev/null
+++ b/README.md
@@ -0,0 +1,26 @@
+# Taverna Workbench 3.x
+
+## Installing
+
+Pre-requisites: 
+* [Maven 3](http://maven.apache.org/download.cgi) 
+* [Java JDK 7](http://www.oracle.com/technetwork/java/javase/downloads/index.html)
+
+Installing:
+
+    git checkout devel
+    mvn install
+    cd target/taverna-workbench-3.0.1-SNAPSHOT-dev/taverna-workbench-3.0.1-SNAPSHOT
+    ./taverna.sh # or taverna.bat
+
+# License
+
+(c) 2005-2014 University of Manchester
+
+Licensed under [Lesser GPL 2.1](https://www.gnu.org/licenses/lgpl-2.1.html). 
+
+
+# Contact
+
+Post to the [https://lists.sourceforge.net/lists/listinfo/taverna-hackers](taverna-hackers) list 
+for any questions, or contact the [http://www.taverna.org.uk/about/contact-us/](myGrid support).
diff --git a/pom.xml b/pom.xml
new file mode 100644
index 0000000..accb5c5
--- /dev/null
+++ b/pom.xml
@@ -0,0 +1,772 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
+	<modelVersion>4.0.0</modelVersion>
+	<parent>
+		<groupId>net.sf.taverna</groupId>
+		<artifactId>taverna-parent</artifactId>
+		<version>3.0.1-SNAPSHOT</version>
+	</parent>
+	<groupId>uk.org.taverna.workbench</groupId>
+	<artifactId>taverna-workbench-product</artifactId>
+	<name>Taverna Workbench [Developer]</name>
+	<packaging>taverna-application</packaging>
+	<profiles>
+		<profile>
+			<id>dev</id>
+			<activation>
+				<activeByDefault>true</activeByDefault>
+			</activation>
+			<properties>
+				<assembly.descriptor>src/main/assembly/developer-assembly.xml</assembly.descriptor>
+				<profile.updateSite>http://updates.taverna.org.uk/workbench/3.0/dev/</profile.updateSite>
+				<profile.pluginSite>http://updates.taverna.org.uk/workbench/3.0/dev/plugins/</profile.pluginSite>
+			</properties>
+			<distributionManagement>
+				<repository>
+					<id>dev</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/dev</url>
+				</repository>
+				<snapshotRepository>
+					<id>dev</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/dev</url>
+				</snapshotRepository>
+			</distributionManagement>
+		</profile>
+		<profile>
+			<id>beta</id>
+			<properties>
+				<assembly.descriptor>src/main/assembly/nightly-assembly.xml</assembly.descriptor>
+				<profile.updateSite>http://updates.taverna.org.uk/workbench/3.0/beta/</profile.updateSite>
+				<profile.pluginSite>http://updates.taverna.org.uk/workbench/3.0/beta/plugins/</profile.pluginSite>
+			</properties>
+			<distributionManagement>
+				<repository>
+					<id>beta</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/beta</url>
+				</repository>
+				<snapshotRepository>
+					<id>beta</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/beta</url>
+				</snapshotRepository>
+			</distributionManagement>
+		</profile>
+		<profile>
+			<id>stable</id>
+			<properties>
+				<assembly.descriptor>src/main/assembly/release-assembly.xml</assembly.descriptor>
+				<profile.updateSite>http://updates.taverna.org.uk/workbench/3.0/stable/</profile.updateSite>
+				<profile.pluginSite>http://updates.taverna.org.uk/workbench/3.0/stable/plugins/</profile.pluginSite>
+			</properties>
+			<distributionManagement>
+				<repository>
+					<id>stable</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/stable</url>
+				</repository>
+				<snapshotRepository>
+					<id>stable</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/stable</url>
+				</snapshotRepository>
+			</distributionManagement>
+		</profile>
+		<profile>
+			<id>nightly</id>
+			<properties>
+				<assembly.descriptor>src/main/assembly/nightly-assembly.xml</assembly.descriptor>
+				<profile.updateSite>http://updates.taverna.org.uk/workbench/3.0/dev/</profile.updateSite>
+				<profile.pluginSite>http://updates.taverna.org.uk/workbench/3.0/dev/plugins/</profile.pluginSite>
+			</properties>
+			<distributionManagement>
+				<repository>
+					<id>dev</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/dev</url>
+				</repository>
+				<snapshotRepository>
+					<id>dev</id>
+					<url>file:///local/www/taverna/updates/3/workbench/3.0/dev</url>
+				</snapshotRepository>
+			</distributionManagement>
+		</profile>
+	</profiles>
+	<build>
+		<finalName>taverna-workbench-${project.version}</finalName>
+		<plugins>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-assembly-plugin</artifactId>
+				<version>2.4</version>
+				<executions>
+					<execution>
+						<phase>package</phase>
+						<goals>
+							<goal>single</goal>
+						</goals>
+					</execution>
+				</executions>
+				<configuration>
+					<descriptors>
+						<descriptor>${assembly.descriptor}</descriptor>
+					</descriptors>
+					<archiverConfig>
+						<directoryMode>493</directoryMode> <!-- 493(dec) = 755(oct) -->
+						<defaultDirectoryMode>493</defaultDirectoryMode>
+					</archiverConfig>
+				</configuration>
+			</plugin>
+			<plugin>
+				<groupId>org.codehaus.mojo</groupId>
+				<artifactId>buildnumber-maven-plugin</artifactId>
+				<version>1.0-beta-3</version>
+				<executions>
+					<execution>
+						<id>buildnumber-validate</id>
+						<phase>validate</phase>
+						<goals>
+							<goal>create</goal>
+						</goals>
+					</execution>
+				</executions>
+				<configuration>
+					<format>{0,date,yyyyMMdd}T{0,date,HHmm}</format>
+					<items>
+						<item>timestamp</item>
+					</items>
+				</configuration>
+			</plugin>
+			<plugin>
+				<groupId>net.sf.taverna.t2.maven.plugins</groupId>
+				<artifactId>taverna-maven-plugin</artifactId>
+				<version>0.3.1-SNAPSHOT</version>
+				<extensions>true</extensions>
+				<configuration>
+					<buildNumber>${buildNumber}</buildNumber>
+					<updateSite>${profile.updateSite}</updateSite>
+					<pluginSite>${profile.pluginSite}</pluginSite>
+					<frameworkConfigurations>
+						<frameworkConfiguration>
+							<name>org.osgi.framework.bootdelegation</name>
+							<value>sun.*,com.sun.*,java.*,javax.*,org.xml.*,org.w3c.*,apple.*,com.apple.*,org.omg.*,org.ietf.jgss.*,org.jcp.xml.dsig.internal.*</value>
+						</frameworkConfiguration>
+						<frameworkConfiguration>
+							<name>org.osgi.framework.system.packages.extra</name>
+							<value>com.sun.org.apache.xml.internal.utils,org.apache.log4j;version=1.2.16</value>
+						</frameworkConfiguration>
+						<frameworkConfiguration>
+							<name>org.osgi.framework.storage.clean</name>
+							<value>onFirstInit</value>
+						</frameworkConfiguration>
+					</frameworkConfigurations>
+				</configuration>
+			</plugin>
+			<plugin>
+				<groupId>org.apache.maven.plugins</groupId>
+				<artifactId>maven-jar-plugin</artifactId>
+				<version>2.4</version>
+				<configuration>
+					<skipIfEmpty>true</skipIfEmpty>
+				</configuration>
+			</plugin>
+		</plugins>
+		<pluginManagement>
+			<plugins>
+				<!--This plugin's configuration is used to store Eclipse m2e settings
+					only. It has no influence on the Maven build itself. -->
+				<plugin>
+					<groupId>org.eclipse.m2e</groupId>
+					<artifactId>lifecycle-mapping</artifactId>
+					<version>1.0.0</version>
+					<configuration>
+						<lifecycleMappingMetadata>
+							<pluginExecutions>
+								<pluginExecution>
+									<pluginExecutionFilter>
+										<groupId>
+											net.sf.taverna.t2.maven.plugins
+										</groupId>
+										<artifactId>
+											taverna-maven-plugin
+										</artifactId>
+										<versionRange>
+											[0.3.1-SNAPSHOT,)
+										</versionRange>
+										<goals>
+											<goal>
+												profile-generate
+											</goal>
+										</goals>
+									</pluginExecutionFilter>
+									<action>
+										<execute>
+											<runOnIncremental>false</runOnIncremental>
+										</execute>
+									</action>
+								</pluginExecution>
+							</pluginExecutions>
+						</lifecycleMappingMetadata>
+					</configuration>
+				</plugin>
+			</plugins>
+		</pluginManagement>
+	</build>
+	<dependencies>
+
+		<!-- Explicit org.osgi.* with <scope>provided as these are also provided
+			by the felix osgi package. Avoids: Caused by: java.lang.SecurityException:
+			class "org.osgi.framework.hooks.bundle.CollisionHook"'s signer information
+			does not match signer information of other classes in the same package -->
+
+		<dependency>
+			<groupId>org.osgi</groupId>
+			<artifactId>org.osgi.core</artifactId>
+			<version>4.3.1</version>
+			<scope>provided</scope>
+		</dependency>
+		<dependency>
+			<groupId>org.osgi</groupId>
+			<artifactId>org.osgi.compendium</artifactId>
+			<version>4.3.1</version>
+			<scope>provided</scope>
+		</dependency>
+
+		<dependency>
+			<groupId>log4j</groupId>
+			<artifactId>log4j</artifactId>
+			<version>1.2.17</version>
+			<scope>provided</scope>
+		</dependency>
+
+		<!-- Spring DM -->
+		<dependency>
+			<groupId>net.sourceforge.cglib</groupId>
+			<artifactId>com.springsource.net.sf.cglib</artifactId>
+			<version>2.1.3</version>
+		</dependency>
+		<dependency>
+			<groupId>org.springframework.osgi</groupId>
+			<artifactId>spring-osgi-annotation</artifactId>
+			<version>2.0.0.M1</version>
+		</dependency>
+		<dependency>
+			<groupId>org.springframework.osgi</groupId>
+			<artifactId>spring-osgi-extender</artifactId>
+			<version>2.0.0.M1</version>
+		</dependency>
+
+		<!-- Spring -->
+		<dependency>
+			<groupId>org.springframework</groupId>
+			<artifactId>org.springframework.context</artifactId>
+			<version>3.0.5.RELEASE</version>
+		</dependency>
+
+		<!-- Java Extension Implementations -->
+		<dependency>
+			<groupId>javax.xml.bind</groupId>
+			<artifactId>com.springsource.javax.xml.bind</artifactId>
+			<version>2.2.0</version>
+		</dependency>
+		<dependency>
+			<groupId>javax.activation</groupId>
+			<artifactId>com.springsource.javax.activation</artifactId>
+			<version>1.1.1</version>
+		</dependency>
+		<dependency> <!-- required by bsh -->
+			<groupId>javax.servlet</groupId>
+			<artifactId>com.springsource.javax.servlet</artifactId>
+			<version>2.5.0</version>
+		</dependency>
+		<dependency>
+			<groupId>javax.jms</groupId>
+			<artifactId>com.springsource.javax.jms</artifactId>
+			<version>1.1.0</version>
+		</dependency>
+		<dependency>
+			<groupId>javax.xml.soap</groupId>
+			<artifactId>com.springsource.javax.xml.soap</artifactId>
+			<version>1.3.0</version>
+		</dependency>
+		<dependency>
+			<groupId>javax.xml.stream</groupId>
+			<artifactId>com.springsource.javax.xml.stream</artifactId>
+			<version>1.0.1</version>
+		</dependency>
+		<dependency>
+			<groupId>javax.mail</groupId>
+			<artifactId>com.springsource.javax.mail</artifactId>
+			<version>1.4.1</version>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.commons</groupId>
+			<artifactId>com.springsource.org.apache.commons.codec</artifactId>
+			<version>1.4.0</version>
+		</dependency>
+
+		<!-- OSGi Compendium Services -->
+		<dependency>
+			<groupId>uk.org.taverna.osgi.services</groupId>
+			<artifactId>xml-parser-service</artifactId>
+			<version>0.1.1</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.osgi.services</groupId>
+			<artifactId>xml-transformer-service</artifactId>
+			<version>0.1.1</version>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.felix</groupId>
+			<artifactId>org.apache.felix.eventadmin</artifactId>
+			<version>1.3.2</version>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.felix</groupId>
+			<artifactId>org.apache.felix.configadmin</artifactId>
+			<version>1.6.0</version>
+		</dependency>
+
+		<!-- Taverna Activities -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>apiconsumer-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>beanshell-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>biomart-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>dataflow-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<!-- <dependency> <groupId>net.sf.taverna.t2.activities</groupId> <artifactId>external-tool-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version> </dependency> -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>localworker-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>rest-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>rshell-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>soaplab-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>spreadsheet-import-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>stringconstant-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>wsdl-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.activities</groupId>
+			<artifactId>xpath-activity</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Taverna Activities UI -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>apiconsumer-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>beanshell-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>biomart-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>dataflow-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>localworker-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>rest-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>rshell-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>spreadsheet-import-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>soaplab-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>stringconstant-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>wsdl-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>unrecognized-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-activities</groupId>
+			<artifactId>xpath-activity-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Taverna Workbench -->
+		<dependency>
+			<groupId>uk.org.taverna.workbench</groupId>
+			<artifactId>taverna-workbench</artifactId>
+			<version>0.1.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>workbench-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>activity-palette-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>configuration-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>edits-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>file-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>menu-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>renderers-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>selection-impl</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>httpproxy-config</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>plugin-manager</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-impl</groupId>
+			<artifactId>update-manager</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<!-- <dependency> <groupId>net.sf.taverna.t2.ui-impl</groupId> <artifactId>report-impl</artifactId>
+			<version>2.0-SNAPSHOT</version> </dependency> -->
+
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>perspective-design</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>perspective-results</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>contextual-views</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>credential-manager-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>data-management-config-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-components</groupId>
+			<artifactId>run-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+
+		<dependency>
+			<!-- <dependency> <groupId>net.sf.taverna.t2.ui-exts</groupId> <artifactId>loop-ui</artifactId>
+				<version>2.0-SNAPSHOT</version> </dependency> -->
+			<groupId>net.sf.taverna.t2.ui-exts</groupId>
+			<artifactId>menu-items</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-exts</groupId>
+			<artifactId>parallelize-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+		<!-- <dependency> <groupId>net.sf.taverna.t2.ui-exts</groupId> <artifactId>renderers-exts</artifactId>
+			<version>2.0-SNAPSHOT</version> </dependency> -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.ui-exts</groupId>
+			<artifactId>retry-ui</artifactId>
+			<version>2.0-SNAPSHOT</version>
+		</dependency>
+
+
+		<!-- Taverna Platform -->
+		<dependency>
+			<groupId>uk.org.taverna.platform</groupId>
+			<artifactId>taverna-capability-impl</artifactId>
+			<version>0.1.3-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.platform</groupId>
+			<artifactId>taverna-run-impl</artifactId>
+			<version>0.1.3-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.platform</groupId>
+			<artifactId>taverna-execution-impl</artifactId>
+			<version>0.1.3-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.platform</groupId>
+			<artifactId>taverna-execution-local</artifactId>
+			<version>0.1.3-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Taverna Commons -->
+		<dependency>
+			<groupId>uk.org.taverna.configuration</groupId>
+			<artifactId>taverna-configuration-impl</artifactId>
+			<version>0.1.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.configuration</groupId>
+			<artifactId>taverna-app-configuration-impl</artifactId>
+			<version>0.1.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.configuration</groupId>
+			<artifactId>taverna-database-configuration-impl</artifactId>
+			<version>0.1.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.commons</groupId>
+			<artifactId>taverna-download-impl</artifactId>
+			<version>0.1.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.commons</groupId>
+			<artifactId>taverna-plugin-impl</artifactId>
+			<version>0.1.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.commons</groupId>
+			<artifactId>taverna-services-impl</artifactId>
+			<version>0.1.0-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.commons</groupId>
+			<artifactId>taverna-update-impl</artifactId>
+			<version>0.1.0-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Scufl2 -->
+		<dependency>
+			<groupId>uk.org.taverna.scufl2</groupId>
+			<artifactId>scufl2-api</artifactId>
+			<version>0.13.1</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.scufl2</groupId>
+			<artifactId>scufl2-rdfxml</artifactId>
+			<version>0.13.1</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.scufl2</groupId>
+			<artifactId>scufl2-t2flow</artifactId>
+			<version>0.13.2-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.scufl2</groupId>
+			<artifactId>scufl2-validation-structural</artifactId>
+			<version>0.13.1</version>
+		</dependency>
+		<dependency>
+			<groupId>uk.org.taverna.scufl2</groupId>
+			<artifactId>scufl2-validation-correctness</artifactId>
+			<version>0.13.1</version>
+		</dependency>
+
+		<!-- Data bundle -->
+		<dependency>
+			<groupId>uk.org.taverna.databundle</groupId>
+			<artifactId>databundle</artifactId>
+			<version>0.2.1</version>
+		</dependency>
+		<!-- HTTP client needed by Data Bundle -->
+		<dependency>
+			<groupId>org.apache.httpcomponents</groupId>
+			<artifactId>httpclient-osgi</artifactId>
+			<version>4.2.5</version>
+		</dependency>
+		<dependency>
+			<groupId>org.apache.httpcomponents</groupId>
+			<artifactId>httpcore-osgi</artifactId>
+			<version>4.2.5</version>
+		</dependency>
+		<!-- Jena bundle needed by jsonld-java-jena -->
+		<!-- See https://github.com/stain/jena/tree/jena-bundle/jena-bundle -->
+		<dependency>
+			<groupId>org.apache.jena</groupId>
+			<artifactId>jena-bundle</artifactId>
+			<version>2.11.0-SNAPSHOT</version>
+		</dependency>
+		<!-- slf4j implementation -->
+		<dependency>
+			<groupId>org.slf4j</groupId>
+			<artifactId>slf4j-api</artifactId>
+			<version>1.7.5</version>
+		</dependency>
+		<dependency>
+			<groupId>org.slf4j</groupId>
+			<artifactId>slf4j-log4j12</artifactId>
+			<version>1.7.5</version>
+		</dependency>
+
+		<!-- Taverna Security -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.security</groupId>
+			<artifactId>credential-manager-impl</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Taverna Workflow Engine -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>workflowmodel-impl</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>workflowmodel-core-extensions</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>reference-impl</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>reference-core-extensions</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+
+		<!-- Taverna Provenance -->
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>provenance-derby</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+		<dependency>
+			<groupId>net.sf.taverna.t2.core</groupId>
+			<artifactId>provenance-mysql</artifactId>
+			<version>2.0.1-SNAPSHOT</version>
+		</dependency>
+
+	</dependencies>
+
+	<repositories>
+		<repository>
+			<releases />
+			<snapshots>
+				<enabled>false</enabled>
+			</snapshots>
+			<id>mygrid-repository</id>
+			<name>myGrid Repository</name>
+			<url>http://www.mygrid.org.uk/maven/repository</url>
+		</repository>
+		<repository>
+			<releases>
+				<enabled>false</enabled>
+			</releases>
+			<snapshots />
+			<id>mygrid-snapshot-repository</id>
+			<name>myGrid Snapshot Repository</name>
+			<url>http://www.mygrid.org.uk/maven/snapshot-repository</url>
+		</repository>
+		<repository>
+			<id>spring-maven-milestone</id>
+			<name>Springframework Maven Repository</name>
+			<url>http://maven.springframework.org/milestone</url>
+		</repository>
+		<repository>
+			<id>com.springsource.repository.bundles.milestone</id>
+			<name>SpringSource Enterprise Bundle Repository - SpringSource Bundle Milestones</name>
+			<url>http://repository.springsource.com/maven/bundles/milestone</url>
+		</repository>
+		<repository>
+			<id>OPS4J</id>
+			<url>http://repository.ops4j.org/maven2</url>
+		</repository>
+	</repositories>
+</project>
diff --git a/src/main/assembly/dependencies-component.xml b/src/main/assembly/dependencies-component.xml
new file mode 100644
index 0000000..0e8640e
--- /dev/null
+++ b/src/main/assembly/dependencies-component.xml
@@ -0,0 +1,21 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<component
+	xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/component/1.1.2"
+	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/component/1.1.2 http://maven.apache.org/xsd/component-1.1.2.xsd">
+
+	<fileSets>
+		<fileSet>
+			<directory>src/main/etc</directory>
+			<fileMode>0755</fileMode>
+			<outputDirectory></outputDirectory>
+			<filtered>true</filtered>
+		</fileSet>
+		<fileSet>
+			<directory>${project.build.directory}/taverna-tmp</directory>
+			<fileMode>0755</fileMode>
+			<outputDirectory></outputDirectory>
+		</fileSet>
+	</fileSets>
+
+</component>
\ No newline at end of file
diff --git a/src/main/assembly/developer-assembly.xml b/src/main/assembly/developer-assembly.xml
new file mode 100644
index 0000000..ae2a7c3
--- /dev/null
+++ b/src/main/assembly/developer-assembly.xml
@@ -0,0 +1,13 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<assembly
+	xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0"
+	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0 http://maven.apache.org/xsd/assembly-1.1.0.xsd">
+	<id>dev</id>
+	<formats>
+		<format>dir</format>
+	</formats>
+	<componentDescriptors>
+		<componentDescriptor>dependencies-component.xml</componentDescriptor>
+	</componentDescriptors>
+</assembly>
diff --git a/src/main/assembly/nightly-assembly.xml b/src/main/assembly/nightly-assembly.xml
new file mode 100644
index 0000000..d5b631d
--- /dev/null
+++ b/src/main/assembly/nightly-assembly.xml
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<assembly
+	xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0"
+	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0 http://maven.apache.org/xsd/assembly-1.1.0.xsd">
+	<id>nightly</id>
+	<baseDirectory>taverna-workbench-${project.version}-${buildNumber}-nightly</baseDirectory>
+	<formats>
+		<!-- <format>dir</format> -->
+		<format>zip</format>
+	</formats>
+	<componentDescriptors>
+		<componentDescriptor>dependencies-component.xml</componentDescriptor>
+	</componentDescriptors>
+</assembly>
diff --git a/src/main/assembly/release-assembly.xml b/src/main/assembly/release-assembly.xml
new file mode 100644
index 0000000..a83f9b8
--- /dev/null
+++ b/src/main/assembly/release-assembly.xml
@@ -0,0 +1,15 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<assembly
+	xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0"
+	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+	xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.0 http://maven.apache.org/xsd/assembly-1.1.0.xsd">
+	<id>release</id>
+	<baseDirectory>taverna-workbench-${project.version}</baseDirectory>
+	<formats>
+		<!-- <format>dir</format> -->
+		<format>zip</format>
+	</formats>
+	<componentDescriptors>
+		<componentDescriptor>dependencies-component.xml</componentDescriptor>
+	</componentDescriptors>
+</assembly>
diff --git a/src/main/etc/conf/log4j.properties b/src/main/etc/conf/log4j.properties
new file mode 100644
index 0000000..5014f2b
--- /dev/null
+++ b/src/main/etc/conf/log4j.properties
@@ -0,0 +1,14 @@
+# By default, WARN (our external libraries)
+log4j.rootLogger=INFO, CONSOLE
+
+# Get rid of some xml sec warnings
+log4j.logger.org.apache.ws.security=ERROR
+log4j.logger.org.apache.commons.httpclient=ERROR
+
+# Default output to console is restrictive
+log4j.appender.CONSOLE=org.apache.log4j.ConsoleAppender
+log4j.appender.CONSOLE.layout=org.apache.log4j.PatternLayout
+log4j.appender.CONSOLE.layout.ConversionPattern=%-5p %d{ISO8601} (%c:%L) - %m%n
+
+# Output WARN and above to console -
+log4j.appender.CONSOLE.Threshold=ERROR
\ No newline at end of file
diff --git a/src/main/etc/conf/logging.properties b/src/main/etc/conf/logging.properties
new file mode 100644
index 0000000..b03a43f
--- /dev/null
+++ b/src/main/etc/conf/logging.properties
@@ -0,0 +1,10 @@
+handlers = java.util.logging.ConsoleHandler, java.util.logging.FileHandler
+
+.level = ALL
+
+java.util.logging.ConsoleHandler.level = WARNING
+java.util.logging.ConsoleHandler.formatter = java.util.logging.SimpleFormatter
+
+java.util.logging.FileHandler.level = ALL
+java.util.logging.FileHandler.count = 5
+java.util.logging.FileHandler.limit = 1048576
diff --git a/src/main/etc/conf/taverna.app.properties b/src/main/etc/conf/taverna.app.properties
new file mode 100644
index 0000000..9634438
--- /dev/null
+++ b/src/main/etc/conf/taverna.app.properties
@@ -0,0 +1,2 @@
+taverna.app.name=taverna-workbench-3.0.0
+taverna.app.title=Taverna Workbench 3.0.0
diff --git a/src/main/etc/taverna.bat b/src/main/etc/taverna.bat
new file mode 100644
index 0000000..ebc9580
--- /dev/null
+++ b/src/main/etc/taverna.bat
@@ -0,0 +1,17 @@
+@ECHO OFF
+
+REM Taverna startup script
+
+REM distribution directory
+set TAVERNA_HOME=%~dp0
+
+
+REM 1 GB memory, 400 MB for classes
+set ARGS=-Xmx1g -XX:MaxPermSize=400m
+
+REM Taverna system properties
+set ARGS=%ARGS% "-Dlog4j.configuration=file:///%TAVERNA_HOME%conf/log4j.properties"
+set ARGS=%ARGS% "-Djava.util.logging.config.file=%TAVERNA_HOME%conf/logging.properties"
+set ARGS=%ARGS% "-Dtaverna.app.startup=%TAVERNA_HOME%."
+
+java %ARGS% -jar "%TAVERNA_HOME%lib\uk.org.taverna.workbench\taverna-workbench-0.1.0-SNAPSHOT.jar" %*
diff --git a/src/main/etc/taverna.sh b/src/main/etc/taverna.sh
new file mode 100644
index 0000000..aedd87b
--- /dev/null
+++ b/src/main/etc/taverna.sh
@@ -0,0 +1,25 @@
+#!/bin/sh
+
+set -e
+
+## resolve links - $0 may be a symlink
+prog="$0"
+
+real_path() {
+    readlink -m "$1" 2>/dev/null || python -c 'import os,sys;print os.path.realpath(sys.argv[1])' "$1"
+}
+
+realprog=`real_path "$prog"`
+taverna_home=`dirname "$realprog"`
+javabin=java
+if test -x "$JAVA_HOME/bin/java"; then
+    javabin="$JAVA_HOME/bin/java"
+fi
+
+# 1 GB memory, 400 MB for classes
+exec "$javabin" -Xmx1g -XX:MaxPermSize=400m \
+  "-Dlog4j.configuration=file://$taverna_home/conf/log4j.properties " \
+  "-Djava.util.logging.config.file=$taverna_home/conf/logging.properties " \
+  "-Dtaverna.app.startup=$taverna_home" \
+  -jar "$taverna_home/lib/uk.org.taverna.workbench/taverna-workbench-0.1.0-SNAPSHOT.jar" \
+  ${1+"$@"}