Ensure that we apply patches to the correct directory.
diff --git a/server-webapp/pom.xml b/server-webapp/pom.xml
index 4a1cdfa..f5d7584 100644
--- a/server-webapp/pom.xml
+++ b/server-webapp/pom.xml
@@ -25,6 +25,7 @@
 		<version.jdoapi>3.0.1</version.jdoapi>
 		<forker.module>server-unix-forker</forker.module>
 		<util.dir>${project.build.directory}/${project.build.finalName}/WEB-INF/classes/util</util.dir>
+		<cmdline.dir>${util.dir}/taverna-commandline-${edition.commandline}-${version.commandline}</cmdline.dir>
 	</properties>
 
 	<dependencies>
@@ -719,7 +720,7 @@
 							<goal>copy-resources</goal>
 						</goals>
 						<configuration>
-							<outputDirectory>${util.dir}/taverna-commandline-${version.commandline}</outputDirectory>
+							<outputDirectory>${cmdline.dir}</outputDirectory>
 							<resources>
 								<resource>
 									<directory>src/main/replacementscripts</directory>
@@ -744,9 +745,9 @@
 						</goals>
 						<configuration>
 							<executable>/bin/sh</executable>
-							<workingDirectory>${util.dir}/taverna-commandline-${version.commandline}</workingDirectory>
+							<workingDirectory>${cmdline.dir}</workingDirectory>
 							<environmentVariables>
-								<RAVEN_APPHOME>${util.dir}/taverna-commandline-${version.commandline}</RAVEN_APPHOME>
+								<RAVEN_APPHOME>${cmdline.dir}</RAVEN_APPHOME>
 							</environmentVariables>
 							<arguments>
 								<argument>./executeworkflow.sh</argument>