docker/nexus-webapp/Dockerfile

# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements.  See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not use this file except in compliance with
# the License.  You may obtain a copy of the License at
#
#   http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

FROM nexusjpl/alpine-pyspark:2.4.4
#FROM python:2.7
#FROM alpine:3.12


MAINTAINER Apache SDAP "dev@sdap.apache.org"


ARG CONDA_VERSION="4.7.12.1"
ARG CONDA_MD5="81c773ff87af5cfac79ab862942ab6b3"
ARG CONDA_DIR="/opt/conda"

ENV PYTHONPATH=${PYTHONPATH}:/opt/spark/python:/opt/spark/python/lib/py4j-0.10.7-src.zip:/opt/spark/python/lib/pyspark.zip/python:/usr/lib \
    NEXUS_SRC=/tmp/incubator-sdap-nexus \
    PROJ_LIB=/opt/conda/lib/python2.7/site-packages/pyproj/data	\
    PATH="$CONDA_DIR/bin:$PATH" \
    PYTHONDONTWRITEBYTECODE=1 \
    PYSPARK_DRIVER_PYTHON=/opt/conda/bin/python \
    PYSPARK_PYTHON=/opt/conda/bin/python \
    LD_LIBRARY_PATH=/usr/lib 

RUN apk add --update --no-cache \
    bzip2 \
    gcc \
    git \
    mesa-gl \
    wget \
    curl \
    which \
    python3 \
    bash==4.4.19-r1 \
    libc-dev \
    libressl2.7-libcrypto

RUN  apk upgrade musl

WORKDIR /tmp

RUN apk del libc6-compat
RUN apk --no-cache add wget zlib && \
    wget -q -O /etc/apk/keys/sgerrand.rsa.pub https://alpine-pkgs.sgerrand.com/sgerrand.rsa.pub && \
    wget https://github.com/sgerrand/alpine-pkg-glibc/releases/download/2.30-r0/glibc-2.30-r0.apk && \
    apk add glibc-2.30-r0.apk && \
    ln -s /lib/libz.so.1 /usr/glibc-compat/lib/ && \
    ln -s /lib/libc.musl-x86_64.so.1 /usr/glibc-compat/lib && \
    ln -s /usr/lib/libgcc_s.so.1 /usr/glibc-compat/lib

COPY docker/nexus-webapp/install_conda.sh ./install_conda.sh
RUN /tmp/install_conda.sh 

RUN conda install python=2.7
RUN cd /usr/lib && ln -s libcom_err.so.2 libcom_err.so.3 && \ 
    cd /opt/conda/lib && \
    ln -s libnetcdf.so.11 libnetcdf.so.7 && \
    ln -s libkea.so.1.4.6 libkea.so.1.4.5 && \
    ln -s libhdf5_cpp.so.12 libhdf5_cpp.so.10 && \
    ln -s libjpeg.so.9 libjpeg.so.8

# Change REBUILD_CODE if you want tell Docker not to use cached layers from this line on
ARG REBUILD_CODE=0

ARG APACHE_NEXUSPROTO=https://github.com/apache/incubator-sdap-nexusproto.git
ARG APACHE_NEXUSPROTO_BRANCH=master

COPY docker/nexus-webapp/install_nexusproto.sh ./install_nexusproto.sh
RUN /tmp/install_nexusproto.sh $APACHE_NEXUSPROTO $APACHE_NEXUSPROTO_BRANCH

COPY data-access /incubator-sdap-nexus/data-access
COPY analysis /incubator-sdap-nexus/analysis

WORKDIR /incubator-sdap-nexus/data-access
RUN python setup.py install

WORKDIR /incubator-sdap-nexus/analysis
RUN python setup.py install

COPY tools /incubator-sdap-nexus/tools

# Upgrade kubernetes client jar from the default version
RUN rm /opt/spark/jars/kubernetes-client-4.1.2.jar
ADD https://repo1.maven.org/maven2/io/fabric8/kubernetes-client/4.4.2/kubernetes-client-4.4.2.jar /opt/spark/jars