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        <div class="section"><h2>CPD Results</h2><p>The following document contains the results of PMD's  <a href="http://pmd.sourceforge.net/cpd.html">CPD</a> 4.2.5.</p></div><div class="section"><h2>Duplications</h2><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.html#205">205</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.html#261">261</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    private List&lt;Individual&gt; getIndividuals( XMLReader xml, boolean isCommitor, String xpathExpr )
        throws XMLException
    {
        List&lt;Individual&gt; ret = new ArrayList&lt;Individual&gt;();

        List&lt;Element&gt; modelPersonList = xml.getElementList( xpathExpr );

        Iterator&lt;Element&gt; iter = modelPersonList.iterator();
        while ( iter.hasNext() )
        {
            Element elemPerson = iter.next();
            Individual individual = new Individual();

            if ( isCommitor )
            {
                individual.setPrincipal( elemPerson.elementTextTrim( &quot;id&quot; ) );
            }

            individual.setCommitor( isCommitor );
            individual.setEmail( elemPerson.elementTextTrim( &quot;email&quot; ) );
            individual.setName( elemPerson.elementTextTrim( &quot;name&quot; ) );
            individual.setOrganization( elemPerson.elementTextTrim( &quot;organization&quot; ) );
            individual.setOrganizationUrl( elemPerson.elementTextTrim( &quot;organizationUrl&quot; ) );
            individual.setUrl( elemPerson.elementTextTrim( &quot;url&quot; ) );
            individual.setTimezone( elemPerson.elementTextTrim( &quot;timezone&quot; ) );
            individual.setIndividualEmail( elemPerson.elementTextTrim( &quot;email&quot; ) );

            // Roles
            Element elemRoles = elemPerson.element( &quot;roles&quot; );
            if ( elemRoles != null )
            {
                List&lt;Element&gt; roleNames = elemRoles.elements( &quot;role&quot; );
                Iterator&lt;Element&gt; itRole = roleNames.iterator();
                while ( itRole.hasNext() )
                {
                    Element role = itRole.next();
                    individual.addRole( role.getTextTrim() );
                }
            }

            // Properties
            individual.setProperties( getProperties( elemPerson.element( &quot;properties&quot; ) ) );

            ret.add( individual );
        }

        return ret;
    }

    private IssueManagement getIssueManagement( XMLReader xml )
        throws XMLException
    {
        Element elemIssueMgmt = xml.getElement( &quot;//project/issueManagement&quot; );</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.html#306">306</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.html#355">355</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    private List&lt;MailingList&gt; getMailingLists( XMLReader xml )
        throws XMLException
    {
        List&lt;MailingList&gt; mailingLists = new ArrayList&lt;MailingList&gt;();

        List&lt;Element&gt; mailingListElems = xml.getElementList( &quot;//project/mailingLists/mailingList&quot; );
        for ( Element elemMailingList : mailingListElems )
        {
            MailingList mlist = new MailingList();

            mlist.setName( elemMailingList.elementTextTrim( &quot;name&quot; ) );
            mlist.setSubscribeAddress( elemMailingList.elementTextTrim( &quot;subscribe&quot; ) );
            mlist.setUnsubscribeAddress( elemMailingList.elementTextTrim( &quot;unsubscribe&quot; ) );
            mlist.setPostAddress( elemMailingList.elementTextTrim( &quot;post&quot; ) );
            mlist.setMainArchiveUrl( elemMailingList.elementTextTrim( &quot;archive&quot; ) );

            Element elemOtherArchives = elemMailingList.element( &quot;otherArchives&quot; );
            if ( elemOtherArchives != null )
            {
                List&lt;String&gt; otherArchives = new ArrayList&lt;String&gt;();
                List&lt;Element&gt; others = elemOtherArchives.elements( &quot;otherArchive&quot; );
                for ( Element other : others )
                {
                    String otherArchive = other.getTextTrim();
                    otherArchives.add( otherArchive );
                }

                mlist.setOtherArchives( otherArchives );
            }

            mailingLists.add( mlist );
        }

        return mailingLists;
    }

    private Organization getOrganization( XMLReader xml )
        throws XMLException
    {
        Element elemOrg = xml.getElement( &quot;//project/organization&quot; );
        if ( elemOrg != null )
        {
            Organization org = new Organization();

            org.setOrganizationName( elemOrg.elementTextTrim( &quot;name&quot; ) );
            org.setName( elemOrg.elementTextTrim( &quot;name&quot; ) );
            org.setUrl( elemOrg.elementTextTrim( &quot;url&quot; ) );

            return org;
        }

        return null;
    }</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.html#91">91</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.html#102">102</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>        model.setRelocation( getRelocation( xml ) );

        model.setOrigin( &quot;filesystem&quot; );

        return model;
    }

    private ArtifactReference getArtifactReference( Element elemPlugin, String defaultType )
    {
        ArtifactReference reference = new ArtifactReference();

        reference.setGroupId( StringUtils.defaultString( elemPlugin.elementTextTrim( &quot;groupId&quot; ) ) );
        reference.setArtifactId( elemPlugin.elementTextTrim( &quot;artifactId&quot; ) );
        reference.setVersion( StringUtils.defaultString( elemPlugin.elementTextTrim( &quot;version&quot; ) ) );
        reference.setClassifier( StringUtils.defaultString( elemPlugin.elementTextTrim( &quot;classifier&quot; ) ) );
        reference.setType( StringUtils.defaultIfEmpty( elemPlugin.elementTextTrim( &quot;type&quot; ), defaultType ) );

        return reference;
    }

    /**
     * Get List of {@link ArtifactReference} objects from xpath expr.
     */
    private List&lt;ArtifactReference&gt; getArtifactReferenceList( XMLReader xml, String xpathExpr, String defaultType )
        throws XMLException
    {
        List&lt;ArtifactReference&gt; refs = new ArrayList&lt;ArtifactReference&gt;();

        Iterator&lt;Element&gt; it = xml.getElementList( xpathExpr ).iterator();
        while ( it.hasNext() )
        {
            Element elemPlugin = it.next();

            refs.add( getArtifactReference( elemPlugin, defaultType ) );
        }

        return refs;
    }

    private List&lt;ArtifactReference&gt; getBuildExtensions( XMLReader xml )</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.html#143">143</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.html#169">169</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    private List&lt;Dependency&gt; getDependencyList( XMLReader xml, String parts[] )
        throws XMLException
    {
        List&lt;Dependency&gt; dependencyList = new ArrayList&lt;Dependency&gt;();

        Element project = xml.getElement( &quot;//project&quot; );

        Element depsParent = project;

        for ( String part : parts )
        {
            depsParent = depsParent.element( part );
            if ( depsParent == null )
            {
                return dependencyList;
            }
        }

        Iterator&lt;Element&gt; it = depsParent.elementIterator( &quot;dependency&quot; );
        while ( it.hasNext() )
        {
            Element elemDependency = it.next();
            Dependency dependency = new Dependency();

            dependency.setGroupId( elemDependency.elementTextTrim( &quot;groupId&quot; ) );
            dependency.setArtifactId( elemDependency.elementTextTrim( &quot;artifactId&quot; ) );
            dependency.setVersion( elemDependency.elementTextTrim( &quot;version&quot; ) );

            dependency.setClassifier( StringUtils.defaultString( elemDependency.elementTextTrim( &quot;classifier&quot; ) ) );</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.html#205">205</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.html#245">245</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    public Set&lt;String&gt; getVersions( VersionedReference reference )
        throws ContentNotFoundException
    {
        File groupDir = new File( repository.getLocation(), reference.getGroupId() );

        if ( !groupDir.exists() )
        {
            throw new ContentNotFoundException( &quot;Unable to get versions using a non-existant groupId directory: &quot;
                + groupDir.getAbsolutePath() );
        }

        if ( !groupDir.isDirectory() )
        {
            throw new ContentNotFoundException( &quot;Unable to get versions using a non-directory: &quot;
                + groupDir.getAbsolutePath() );
        }

        Set&lt;String&gt; foundVersions = new HashSet&lt;String&gt;();

        // First gather up the versions found as artifacts in the managed repository.
        File typeDirs[] = groupDir.listFiles();
        for ( File typeDir : typeDirs )
        {
            if ( !typeDir.isDirectory() )
            {
                // Skip it, we only care about directories.
                continue;
            }

            if ( !typeDir.getName().endsWith( &quot;s&quot; ) )
            {
                // Skip it, we only care about directories that end in &quot;s&quot;.
            }</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel300Reader.html#278">278</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/readers/ProjectModel400Reader.html#328">328</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    private List&lt;License&gt; getLicenses( XMLReader xml )
        throws XMLException
    {
        List&lt;License&gt; licenses = new ArrayList&lt;License&gt;();

        Element elemLicenses = xml.getElement( &quot;//project/licenses&quot; );

        if ( elemLicenses != null )
        {
            List&lt;Element&gt; licenseList = elemLicenses.elements( &quot;license&quot; );
            for ( Element elemLicense : licenseList )
            {
                License license = new License();

                // TODO: Create LicenseIdentity class to managed license ids.
                // license.setId( elemLicense.elementTextTrim(&quot;id&quot;) );
                license.setName( elemLicense.elementTextTrim( &quot;name&quot; ) );
                license.setUrl( elemLicense.elementTextTrim( &quot;url&quot; ) );
                license.setComments( elemLicense.elementTextTrim( &quot;comments&quot; ) );

                licenses.add( license );
            }
        }

        return licenses;
    }</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.html#393">393</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.html#425">425</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>    private void getVersionedVersions( File typeDir, VersionedReference reference, Set&lt;String&gt; foundVersions )
    {
        File repoFiles[] = typeDir.listFiles();
        for ( int i = 0; i &lt; repoFiles.length; i++ )
        {
            if ( repoFiles[i].isDirectory() )
            {
                // Skip it. it's a directory.
                continue;
            }

            String relativePath = PathUtil.getRelative( repository.getLocation(), repoFiles[i] );

            if ( filetypes.matchesArtifactPattern( relativePath ) )
            {
                try
                {
                    ArtifactReference artifact = toArtifactReference( relativePath );
                    if ( StringUtils.equals( artifact.getArtifactId(), reference.getArtifactId() )
                        &amp;&amp; artifact.getVersion().startsWith( reference.getVersion() ) )
                    {</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/project/ProjectModelMerge.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/ProjectModelMerge.html#441">441</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/project/ProjectModelMerge.java</td><td><a href="./xref/org/apache/maven/archiva/repository/project/ProjectModelMerge.html#491">491</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>        Map&lt;String, Dependency&gt; parentDepMap = createDependencyMap( parentDepMgmt );
        Set&lt;String&gt; uniqueKeys = new HashSet&lt;String&gt;();
        uniqueKeys.addAll( mainDepMap.keySet() );
        uniqueKeys.addAll( parentDepMap.keySet() );

        Iterator&lt;String&gt; it = uniqueKeys.iterator();
        while ( it.hasNext() )
        {
            String key = it.next();
            Dependency parentDep = parentDepMap.get( key );
            Dependency mainDep = mainDepMap.get( key );

            if ( parentDep == null )
            {
                // Means there is no parent depMan entry to override main depMan.
                merged.add( mainDep );
            }
            else
            {
                // Parent depMan entry exists (main doesn't have to).
                // Merge the parent over the main depMan entry.
                merged.add( merge( mainDep, parentDep ) );
            }
        }

        return merged;
    }</pre></div></td></tr></table><table class="bodyTable"><tr class="a"><th>File</th><th>Line</th></tr><tr class="b"><td>org/apache/maven/archiva/repository/content/ManagedDefaultRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedDefaultRepositoryContent.html#82">82</a></td></tr><tr class="a"><td>org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.java</td><td><a href="./xref/org/apache/maven/archiva/repository/content/ManagedLegacyRepositoryContent.html#144">144</a></td></tr><tr class="b"><td colspan='2'><div class="source"><pre>            supportFile.delete();
        }
    }

    public String getId()
    {
        return repository.getId();
    }

    public Set&lt;ArtifactReference&gt; getRelatedArtifacts( ArtifactReference reference )
        throws ContentNotFoundException
    {
        File artifactFile = toFile( reference );
        File repoDir = artifactFile.getParentFile();

        if ( !repoDir.exists() )
        {
            throw new ContentNotFoundException( &quot;Unable to get related artifacts using a non-existant directory: &quot;
                + repoDir.getAbsolutePath() );
        }

        if ( !repoDir.isDirectory() )
        {
            throw new ContentNotFoundException( &quot;Unable to get related artifacts using a non-directory: &quot;
                + repoDir.getAbsolutePath() );
        }

        Set&lt;ArtifactReference&gt; foundArtifacts = new HashSet&lt;ArtifactReference&gt;();

        // First gather up the versions found as artifacts in the managed repository.
        File projectParentDir = repoDir.getParentFile();</pre></div></td></tr></table></div>
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