blob: 921f26f3e778d556700f28e252cc2b9db1d6cc7c [file] [log] [blame]
@extends('layout.basic')
{{ HTML::script('js/datacat/jquery-1.7.min.js')}}
{{ HTML::script('js/datacat/Three.js')}}
{{ HTML::script('js/datacat/GLmol.js')}}
@section('page-header')
@parent
@stop
@section('content')
<div style="margin-left: 5%; margin-right: 5%; margin-top: 5px; margin-bottom: 5px">
@if ( isset($result))
<h1>Molecule Summary</h1>
</br>
<table class="table table-bordered">
<tr>
<td><strong>FinalGeom</strong></td>
<td>
<div id="mol" style="width: 200px; height: 200px; background-color: black;"></div>
@if(isset($result['PDB']))
<textarea id="mol_src" style="display: none;">{{$result['PDB']}}</textarea>
<script type="text/javascript">
$( document ).ready(function() {
var mol = new GLmol('mol', true);
mol.defineRepresentation = function () {
var all = this.getAllAtoms();
var hetatm = this.removeSolvents(this.getHetatms(all));
this.colorByAtom(all, {});
this.colorByChain(all);
var asu = new THREE.Object3D();
this.drawBondsAsStick(asu, hetatm, this.cylinderRadius, this.cylinderRadius);
this.drawBondsAsStick(asu, this.getResiduesById(this.getSidechains(this.getChain(all, ['A'])), [58, 87]),
this.cylinderRadius, this.cylinderRadius);
this.drawBondsAsStick(asu, this.getResiduesById(this.getSidechains(this.getChain(all, ['B'])), [63, 92]),
this.cylinderRadius, this.cylinderRadius);
this.drawCartoon(asu, all, this.curveWidth, this.thickness);
this.drawSymmetryMates2(this.modelGroup, asu, this.protein.biomtMatrices);
this.modelGroup.add(asu);
};
mol.loadMolecule();
});
</script>
@endif
</td>
</tr>
<tr>
<td><strong>InChI</strong></td>
<td>@if(isset($result['InChI']))<a href="#">{{$result['InChI']}}</a>@endif</td>
</tr>
<tr>
<td><strong>InChIKey</strong></td>
<td>@if(isset($result['InChIKey'])){{$result['InChIKey']}}@endif</td>
</tr>
<tr>
<td><strong>SMILES</strong></td>
<td>@if(isset($result['SMILES'])){{$result['SMILES']}}@endif</td>
</tr>
<tr>
<td><strong>CanonicalSMILES</strong></td>
<td>@if(isset($result['CanonicalSMILES'])){{$result['CanonicalSMILES']}}@endif</td>
</tr>
@if(isset($result['Formula']))
<tr>
<td><strong>Formula</strong></td>
<td>{{$result['Formula']}}</td>
</tr>
@endif
</table>
</br>
<h3>Detailed Information</h3>
<table class="table table-bordered">
@if(isset($result['ParsedBy']))
<tr>
<td><strong>ParsedBy</strong></td>
<td>{{$result['ParsedBy']}}</td>
</tr>
@endif
@if(isset($result['Charge']))
<tr>
<td><strong>Charge</strong></td>
<td>{{$result['Charge']}}</td>
</tr>
@endif
@if(isset($result['Multiplicity']))
<tr>
<td><strong>Multiplicity</strong></td>
<td>{{$result['Multiplicity']}}</td>
</tr>
@endif
@if(isset($result['Keywords']))
<tr>
<td><strong>Keywords</strong></td>
<td>({{$result['Keywords']}}</td>
</tr>
@endif
@if(isset($result['CalcType']))
<tr>
<td><strong>CalcType</strong></td>
<td>{{$result['CalcType']}}</td>
</tr>
@endif
@if(isset($result['Methods']))
<tr>
<td><strong>Methods</strong></td>
<td>{{$result['Methods']}}</td>
</tr>
@endif
@if(isset($result['Basis']))
<tr>
<td><strong>Basis</strong></td>
<td>{{$result['Basis']}}</td>
</tr>
@endif
@if(isset($result['NumBasis']))
<tr>
<td><strong>NumBasis</strong></td>
<td>{{$result['NumBasis']}}</td>
</tr>
@endif
@if(isset($result['NumFC']))
<tr>
<td><strong>NumFC</strong></td>
<td>{{$result['NumFC']}}</td>
</tr>
@endif
@if(isset($result['NumVirt']))
<tr>
<td><strong>NumVirt</strong></td>
<td>{{$result['NumVirt']}}</td>
</tr>
@endif
@if(isset($result['JobStatus']))
<tr>
<td><strong>JobStatus</strong></td>
<td>{{$result['JobStatus']}}</td>
</tr>
@endif
@if(isset($result['FinTime']))
<tr>
<td><strong>FinTime</strong></td>
<td>{{$result['FinTime']}}</td>
</tr>
@endif
@if(isset($result['InitGeom']))
<tr>
<td><strong>InitGeom</strong></td>
<td>{{$result['InitGeom']}}</td>
</tr>
@endif
@if(isset($result['FinalGeom']))
<tr>
<td><strong>FinalGeom</strong></td>
<td>{{$result['FinalGeom']}}</td>
</tr>
@endif
@if(isset($result['PG']))
<tr>
<td><strong>PG</strong></td>
<td>{{$result['PG']}}</td>
</tr>
@endif
@if(isset($result['ElecSym']))
<tr>
<td><strong>ElecSym</strong></td>
<td>{{$result['ElecSym']}}</td>
</tr>
@endif
@if(isset($result['NImag']))
<tr>
<td><strong>NImag</strong></td>
<td>{{$result['NImag']}}</td>
</tr>
@endif
@if(isset($result['Energy']))
<tr>
<td><strong>Energy</strong></td>
<td>{{$result['Energy']}}</td>
</tr>
@endif
@if(isset($result['EnergyKcal']))
<tr>
<td><strong>EnergyKcal</strong></td>
<td>{{$result['EnergyKcal']}}</td>
</tr>
@endif
@if(isset($result['ZPE']))
<tr>
<td><strong>ZPE</strong></td>
<td>{{$result['ZPE']}}</td>
</tr>
@endif
@if(isset($result['ZPEKcal']))
<tr>
<td><strong>ZPEKcal</strong></td>
<td>{{$result['ZPEKcal']}}</td>
</tr>
@endif
@if(isset($result['HF']))
<tr>
<td><strong>HF</strong></td>
<td>{{$result['HF']}}</td>
</tr>
@endif
@if(isset($result['HFKcal']))
<tr>
<td><strong>HFKcal</strong></td>
<td>{{$result['HFKcal']}}</td>
</tr>
@endif
@if(isset($result['Thermal']))
<tr>
<td><strong>Thermal</strong></td>
<td>{{$result['Thermal']}}</td>
</tr>
@endif
@if(isset($result['ThermalKcal']))
<tr>
<td><strong>ThermalKcal</strong></td>
<td>{{$result['ThermalKcal']}}</td>
</tr>
@endif
@if(isset($result['Enthalpy']))
<tr>
<td><strong>Enthalpy</strong></td>
<td>{{$result['Enthalpy']}}</td>
</tr>
@endif
@if(isset($result['EnthalpyKcal']))
<tr>
<td><strong>EnthalpyKcal</strong></td>
<td>{{$result['EnthalpyKcal']}}</td>
</tr>
@endif
@if(isset($result['Entropy']))
<tr>
<td><strong>Entropy</strong></td>
<td>{{$result['Entropy']}}</td>
</tr>
@endif
@if(isset($result['EntropyKcal']))
<tr>
<td><strong>EntropyKcal</strong></td>
<td>{{$result['EntropyKcal']}}</td>
</tr>
@endif
@if(isset($result['Gibbs']))
<tr>
<td><strong>Gibbs</strong></td>
<td>{{$result['Gibbs']}}</td>
</tr>
@endif
@if(isset($result['GibbsKcal']))
<tr>
<td><strong>GibbsKcal</strong></td>
<td>{{$result['GibbsKcal']}}</td>
</tr>
@endif
@if(isset($result['OrbSym']))
<tr>
<td><strong>OrbSym</strong></td>
<td>{{$result['OrbSym']}}</td>
</tr>
@endif
@if(isset($result['Dipole']))
<tr>
<td><strong>Dipole</strong></td>
<td>{{$result['Dipole']}}</td>
</tr>
@endif
@if(isset($result['Freq']))
<tr>
<td><strong>Freq</strong></td>
<td>{{$result['Freq']}}</td>
</tr>
@endif
@if(isset($result['AtomWeigh']))
<tr>
<td><strong>AtomWeigh</strong></td>
<td>{{$result['AtomWeigh']}}</td>
</tr>
@endif
@if(isset($result['Conditions']))
<tr>
<td><strong>Conditions</strong></td>
<td>{{$result['Conditions']}}</td>
</tr>
@endif
@if(isset($result['ReacGeom']))
<tr>
<td><strong>ReacGeom</strong></td>
<td>{{$result['ReacGeom']}}</td>
</tr>
@endif
@if(isset($result['ProdGeom']))
<tr>
<td><strong>ProdGeom</strong></td>
<td>{{$result['ProdGeom']}}</td>
</tr>
@endif
@if(isset($result['MulCharge']))
<tr>
<td><strong>MulCharge</strong></td>
<td>{{$result['MulCharge']}}</td>
</tr>
@endif
@if(isset($result['NatCharge']))
<tr>
<td><strong>NatCharge</strong></td>
<td>{{$result['NatCharge']}}</td>
</tr>
@endif
@if(isset($result['S2']))
<tr>
<td><strong>S2</strong></td>
<td>{{$result['S2']}}</td>
</tr>
@endif
@if(isset($result['CodeVersion']))
<tr>
<td><strong>CodeVersion</strong></td>
<td>{{$result['CodeVersion']}}</td>
</tr>
@endif
@if(isset($result['CalcMachine']))
<tr>
<td><strong>CalcMachine</strong></td>
<td>{{$result['CalcMachine']}}</td>
</tr>
@endif
@if(isset($result['CalcBy']))
<tr>
<td><strong>CalcBy</strong></td>
<td>{{$result['CalcBy']}}</td>
</tr>
@endif
@if(isset($result['MemCost']))
<tr>
<td><strong>MemCost</strong></td>
<td>{{$result['MemCost']}}</td>
</tr>
@endif
@if(isset($result['TimeCost']))
<tr>
<td><strong>TimeCost</strong></td>
<td>{{$result['TimeCost']}}</td>
</tr>
@endif
@if(isset($result['CPUTime']))
<tr>
<td><strong>CPUTime</strong></td>
<td>{{$result['CPUTime']}}</td>
</tr>
@endif
@if(isset($result['Convergence']))
<tr>
<td><strong>Convergence</strong></td>
<td>{{$result['Convergence']}}</td>
</tr>
@endif
@if(isset($result['FullPath']))
<tr>
<td><strong>FullPath</strong></td>
<td>{{$result['FullPath']}}</td>
</tr>
@endif
@if(isset($result['InputButGeom']))
<tr>
<td><strong>InputButGeom</strong></td>
<td>{{$result['InputButGeom']}}</td>
</tr>
@endif
@if(isset($result['OtherInfo']))
<tr>
<td><strong>OtherInfo</strong></td>
<td>{{$result['OtherInfo']}}</td>
</tr>
@endif
@if(isset($result['Comments']))
<tr>
<td><strong>Comments</strong></td>
<td>{{$result['Comments']}}</td>
</tr>
@endif
@if(isset($result['NAtom']))
<tr>
<td><strong>NAtom</strong></td>
<td>{{$result['NAtom']}}</td>
</tr>
@endif
@if(isset($result['Nmo']))
<tr>
<td><strong>Nmo</strong></td>
<td>{{$result['Nmo']}}</td>
</tr>
@endif
@if(isset($result['NBasis']))
<tr>
<td><strong>NBasis</strong></td>
<td>{{$result['NBasis']}}</td>
</tr>
@endif
@if(isset($result['AtomNos']))
<tr>
<td><strong>AtomNos</strong></td>
<td>{{json_encode($result['AtomNos'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
@if(isset($result['Homos']))
<tr>
<td><strong>Homos</strong></td>
<td>{{json_encode($result['Homos'])}}</td>
</tr>
@endif
@if(isset($result['ScfEnergies']))
<tr>
<td><strong>ScfEnerfgies</strong></td>
<td>{{json_encode($result['ScfEnergies'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
@if(isset($result['CoreElectrons']))
<tr>
<td><strong>CoreElectrons</strong></td>
<td>{{json_encode($result['CoreElectrons'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
@if(isset($result['MoEnergies']))
<tr>
<td><strong>MoEnergies</strong></td>
<td>{{json_encode($result['MoEnergies'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
@if(isset($result['AtomCoords']))
<tr>
<td><strong>AtomCoords</strong></td>
<td>{{json_encode($result['AtomCoords'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
@if(isset($result['ScfTargets']))
<tr>
<td><strong>ScfTargets</strong></td>
<td>{{json_encode($result['ScfTargets'], JSON_PRETTY_PRINT)}}</td>
</tr>
@endif
</table>
@endif
</div>
@stop